| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0261 |
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| Symbol | |
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| ID | 6178023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 306816 |
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| End bp | 308006 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680005 |
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| Product | elongation factor Tu |
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| Protein accession | YP_001806978 |
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| Protein GI | 172059326 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000273962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.384792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG AAAAGTTTGA GCGGACCAAG CCGCACGTCA ACGTTGGAAC GATCGGTCAC
GTTGACCACG GCAAGACGAC GCTGACGGCA GCGATCACGA CGGTGCTGAC GAAGAAGTTC
GGCGGCGAAG CGAAGGCCTA CGACCAGATC GACGCGGCAC CGGAAGAAAA GGCGCGCGGC
ATCACGATCA ACACGGCACA CGTCGAGTAC GAAACGGCTA ACCGCCACTA CGCACACGTC
GACTGCCCGG GCCACGCTGA CTATGTGAAG AACATGATCA CGGGCGCAGC GCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCAGCAGAC GGCCCGATGC CGCAAACGCG TGAGCACATC
CTGCTGGCGC GTCAGGTTGG CGTTCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG CTGAACTGCT CGAGCTGGTC GAGATGGAAG TTCGCGAACT CCTGTCGAAG
TACGACTTCC CGGGCGACGA CACGCCGATC GTGAAGGGTT CGGCGAAGCT GGCGCTGGAA
GGCGACACGG GCGAGCTGGG CGAAGTGGCG ATCATGAGCC TGGCAGACGC ACTGGACACG
TACATCCCGA CGCCGGAGCG TGCAGTTGAC GGCGCGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CGGGCCGCGG TACGGTGGTG ACGGGTCGTG TCGAGCGCGG CATCGTGAAG
GTCGGCGAAG AAATCGAAAT CGTCGGTATC AAGCCGACGG TGAAGACGAC CTGCACGGGC
GTTGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAGGCAG GCGACAACGT CGGTATCCTG
CTGCGCGGCA CGAAGCGTGA AGACGTGGAG CGTGGCCAGG TTCTGGCGAA GCCGGGTTCG
ATCACGCCGC ACACGCACTT CACGGCTGAA GTGTACGTGC TGAGCAAGGA CGAAGGCGGC
CGTCACACGC CGTTCTTCAA CAACTACCGT CCGCAGTTCT ACTTCCGTAC GACGGACGTG
ACGGGCTCGA TCGAGCTGCC GAAGGACAAG GAAATGGTGA TGCCGGGCGA CAACGTGTCG
ATCACGGTGA AGCTGATCGC TCCGATCGCG ATGGAAGAAG GTCTGCGCTT CGCAATCCGC
GAAGGTGGCC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
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| Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLTKKF GGEAKAYDQI DAAPEEKARG
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLSK YDFPGDDTPI VKGSAKLALE
GDTGELGEVA IMSLADALDT YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI KPTVKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVE RGQVLAKPGS
ITPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE
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