Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0254 |
Symbol | |
ID | 6176687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 293056 |
End bp | 294144 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641679990 |
Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
Protein accession | YP_001806971 |
Protein GI | 172059319 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0292434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0307686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTC CGCAATTTCA CCCGCTGCGT ATCCGCGACG TGCGCCCCGA GACCGCCGAC GCCGTTACCG TCTCCTTCGA CGTGCCGCCG GAGCTGCGCG ATGCGTTCCG CTTCACGCAG GGCCAGTTCG TCACGCTGAA GACCCATATC GACGGCGAGG AAACGCGCCG CTCGTACTCG ATCTGTGTCG GCACGACCGA CTACGACCGC GACGGCGAAC TGCGCATCGG CATCAAGCGC GTGCGCGGCG GCCGTTTCTC GAACTTCGCG TTCGACACGC TGAAGCCCGG CCACACGATC GACGTGATGA CGCCGGACGG CCGCTTCTTC ACGCACCTGA ACGCCGATCA CGGCAAGCAG TACGTCGCGT TCTCCGGCGG CTCGGGCATC ACGCCGGTGC TCGCGATCGT GAAGACGACG CTCGAACTCG AACCGCGCAG CACGTTCACG CTGATCTACG GCAACCGCAG CGTCGACGCG ATCATGTTCG CGGAGGAGCT CGAGGACCTG AAGAACCGCT ACATGGACCG CTTCGTCCTG TATCACGTGC TGTCGGACGA CCAGCAGGAC GTCGAGCTGT TCAATGGCGT CCTCGACCAG GCGAAATGCG CGGAATTCCT CGCCACGCTG ATGCCCGCCG ACGCGATCGA CGAAGCGTTC ATCTGCGGCC CCGCACCGAT GATGGACGCA GCCGAAGCCG CGCTGAAAGC GGCCGGCGTG CCGCAGGCGA AGGTCCATGT CGAACGCTTC GGCACACCGC TGCCGCAGGC CGGCGCACCC GTCGTCGAGA TCACCGACAC GACGCCGGCC GCGGACCTCG AAATCGTTCT CGACGGCAAG AAGCGCAAGC TGCGTCTGCC GTACGAAGGC GTGAGCCTGC TCGACGTGGG CCTGCGCGCG GGCCTCGCGC TGCCCTACGC GTGCAAGGGC GGCGTGTGCT GCACGTGCCG GGCGAAGGTG GTCGAAGGCG AAGTGCGGAT GGAAAAGAAC TACACGCTCG AGGAACACGA AGTGAAGGAC GGCTTCGTGC TCACGTGCCA GTGCCACCCG ATCAGCGACA AGGTCGTCGT AAGCTTCGAC GAGCGTTGA
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Protein sequence | MATPQFHPLR IRDVRPETAD AVTVSFDVPP ELRDAFRFTQ GQFVTLKTHI DGEETRRSYS ICVGTTDYDR DGELRIGIKR VRGGRFSNFA FDTLKPGHTI DVMTPDGRFF THLNADHGKQ YVAFSGGSGI TPVLAIVKTT LELEPRSTFT LIYGNRSVDA IMFAEELEDL KNRYMDRFVL YHVLSDDQQD VELFNGVLDQ AKCAEFLATL MPADAIDEAF ICGPAPMMDA AEAALKAAGV PQAKVHVERF GTPLPQAGAP VVEITDTTPA ADLEIVLDGK KRKLRLPYEG VSLLDVGLRA GLALPYACKG GVCCTCRAKV VEGEVRMEKN YTLEEHEVKD GFVLTCQCHP ISDKVVVSFD ER
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