| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0246 |
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| Symbol | |
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| ID | 6176519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 283735 |
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| End bp | 287325 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641679982 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001806963 |
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| Protein GI | 172059311 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000237135 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCCC CGCTAGACGC CGACCAACGC GCTTCGCTCG AAGCCGCGCT GAAGTCCGTC
ACGCTCGACG ACAAATACAC GCTCGAACGC GGCCGCGCGT ACATGAGCGG CATCCAGGCG
CTCGTGCGCC TGCCGATGCT CCAGCAGGAA CGCGACCGCG CCGCCGGCCT CAACACGGCC
GGCTTCATCT CCGGATATCG CGGTTCGCCG CTCGGCGGCC TCGACCTCTC GCTGTGGAAG
GCCAAGCAGC ACCTCGCCGC CCACCAGATC GTCTTCCAGC CCGGTCTCAA CGAAGATCTC
GCCGCCACCG CCGTGTGGGG CTCGCAGCAG GTGAACCTGT ACCCCGGCGC GAAGTACGAC
GGCGTGTTCG GCATGTGGTA CGGCAAGGGT CCGGGCGTCG ACCGCACCGG TGACGTCTTC
AAGCACGCGA ACTCGGCCGG CTCGTCGCCG CACGGCGGCG TGCTCGTGCT CGCCGGCGAC
GACCACGCGG CGAAATCGTC GACGCTCGCG CACCAGTCCG AACACATCTT CAAGGCCTGC
GGGCTGCCGG TGCTGTTCCC GTCCAACGTG CAGGAATATC TCGACTTCGG CCTGCACGGC
TGGGCGATGA GCCGCTACTC GGGCCTGTGG GTCGCGCTCA AGTGCGTGAC GGACGTGGTC
GAATCGTCGG CGTCGGTCGA CATCGACCCG CATCGCACCG AGATCGTGCT GCCGACCGAC
TTCATCCTGC CGGAAGGCGG CCTGAACATC CGCTGGCCCG ACCCGCCGCT CGTGCAGGAA
GCGCGGCTGC TGGACTACAA GTGGTACGCG GCGCTCGCCT ATGTGCGCGC GAACAAGCTC
GACCGGATCG AGATCGACTC GCCAACCGCG CGCTTCGGGA TCATGACGGG CGGCAAGGCA
TACCTCGACG TGCGCCAGGC GCTGAGCGAC CTCGGCCTCG ACGACGAAAC CTGCGCCCGG
ATCGGCATCC GCCTCTACAA GGTCGGCTGC GTATGGCCGC TCGAGGCGCA AGGCGCGCAG
GCATTCGCGC GCGGCCTCGA CGAAATCCTC GTCGTCGAGG AAAAGCGTCA GATCCTCGAA
TACGCGATCA AGGAAGAGCT GTACAACTGG CCCGATGCGC AGCGCCCGCG CGTATTCGGC
AAGTTCGACG AGAAGGACGG CGCCGGCGGC GAATGGTCGG TGCCGATGGG CAACTGGCTG
CTGCCCGCGC ACTACGAACT GTCGCCCGCG ATCATCGCGA AGGCGATCGC GACGCGCCTC
GAGAAGTTCG AGCTGCCGTC CGACGTGCGC GCGCGCATCG CCGCGCGGCT CGCGGTGATC
AACGCGAAGG AAATGGCGCT CGCGAAGCCG CACGTGCAGA CCGAGCGCAA GCCGTGGTTC
TGCTCGGGCT GCCCGCACAA CACGTCGACC AACGTGCCGG AAGGCTCGCG CGCGATCGCC
GGGATCGGCT GCCACTACAT GACGGTGTGG ATGGACCGCA GCACCAGCAC CTTCAGCCAG
ATGGGCGGCG AAGGCGTGCC GTGGATCGGC CAGGCGCCGT TCACCGACGA AAAGCACGTG
TTCGCGAACC TCGGCGACGG CACCTATTTC CACTCGGGCC TGCTGGCGGT GCGCGCGGCG
ATCTCGTCGA AGGCAAACAT CACCTACAAG ATCCTCTACA ACGACGCCGT CGCAATGACG
GGCGGCCAGC CGGTCGACGG CGTGCTGACG GTGCCGCAGA TCACGCACCA GCTCGCGTCC
GAAGGCGCGA AGAAGATCGT GATCGTCACC GATGAGCCGG AAAAGTACGA CGACCAGAAG
GCGCTGCTCG CGCCGGGCGT GACGATCCAT CACCGCGACC AGCTCGACGA CGTGCAGCGC
GAGCTGCGCG AGATCGAAGG CACGACGATT CTGATCTACG ACCAGACCTG CGCAACCGAG
AAACGCCGCC GCCGCAAACG CGGCACGTAT CCCGATCCGG CGAAGCGCGT CGTGATCAAC
GACGCGGTGT GCGAAGGGTG CGGCGACTGC TCGGTGCAGT CGAACTGCCT GTCGGTCGAG
CCGCTCGAAA CCGAATTCGG CACGAAGCGC CAGATCAACC AGTCGAGCTG CAACAAGGAC
TTCTCGTGCC TGAAGGGCTT CTGCCCGAGC TTCGTCACGG TCGAGGGCGG CCAGTTGAAG
AAGCCGAAGG CCGTGTCGGT CGACGGCGGC GCGCTTCCGC CGATTCCGGA GCCGGCGCTG
CCGGCGATCG ATCGTGCCTA CGGCGTGCTC GTCACGGGCG TCGGCGGCAC GGGCGTCGTC
ACGATCGGCG CGCTGCTCGG CATGGCCGCC CACCTGGAGA ACAAGGGCGT GACCGTGCTC
GACGTCACGG GCCTCGCGCA GAAAGGCGGC GCCGTGATGA GCCACGTACA GATCTCGCAC
GCGCCGACCG ACATCCATGC GACGCGGATC GCGATGGGCG AAGCCGACCT CGTGATCGGC
TGCGACGCGA TCGTCACGGC CGGCGACGAA TGCACGTCGC GGATGCGGCA CGACACGACG
CGCGTGGTCG TCAACAGCGC GCAGACGCCC ACCGCCGAGT TCATCAAGAA CCCGAACTGG
GCGTTCCCGG GCGTGTCCGC CGAAAACGAC ATCCGCGCGG CGGCCGGCTC GGCCGTCGAC
TTCATCGATG CGAACCGCTT CGCGGTCGCG CTGCTCGGCG ACGCGATCTA CACGAACCCG
TTCGTGCTCG GCTACGCGTG GCAGAAAGGC TGGCTGCCGC TGACGCTCGC GTCGCTCGAA
CGCGCGATCG AGCTGAACGC GGTATCGGTC GAGAAGAACC GGGCGGCGTT CGACTGGGGT
CGCCGCGCCG CGCACGACCT CGCGAGCGTG AAGCAGGCTG CGGCCGGCGA CGCGCGCCCC
GTGCAGGGCG CGACGGTGAT CGCGCTACAC ACGAAGAAGG CGGTCGACGC ATTGATCGCG
AAGCGCGTGG AGTTCCTCAC CGCGTACCAG AACGCCGCGT ACGCAGCGCG CTATGCTGCC
TTCGTCGACC GCGTGCGGGC CGCCGAACGC GCGCTGGCGG ACGGCGACGC CGTGCAGGAG
CCGCTGACCG AAGCGGTCGC ACGCAATCTG TTCAAGCTGA TGGCGTACAA GGACGAATAT
GAGGTCGCGC GGCTGCAGTC CGATCCTGCG TTCCTCGCGC GCCTGTCGTC GCAGTTCGAA
GGCGACTGGA AGCTGAAATT CCACCTCGCG CCGCCGCTGT TCGCGAAGAC GGATGCACAC
GGCCATCTCG TGAAGAAGGC GTACGGCCCG TGGATGATGT CCGCGTTCCG GCTGCTCGCG
AAGGCGAAGT TTCTGCGCGG CACCGGGCTC GACCCGTTCG GCCGCACCGA GGAGCGCCGC
ACCGAGCGCG CACTGATCGG CGAGTACGAA GCGCTGATCG GCGAAGTGAC GGCCAAGCTG
AACGCGGCCA ACCGCCCGCT CGCGCTCGAG CTCGCGGCGC TGCCGGACGG CATTCGCGGC
TATGGCCACG TGAAGGAGAA CAACCTGCGC GCGGTGCGCC AGAAGTGGAA CACGCTGCTC
GCGCAGTGGC GTTCGCCGAC GGCCGGGCAG ACGAGCCAGC AGGTCGCGTA A
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| Protein sequence | MNAPLDADQR ASLEAALKSV TLDDKYTLER GRAYMSGIQA LVRLPMLQQE RDRAAGLNTA
GFISGYRGSP LGGLDLSLWK AKQHLAAHQI VFQPGLNEDL AATAVWGSQQ VNLYPGAKYD
GVFGMWYGKG PGVDRTGDVF KHANSAGSSP HGGVLVLAGD DHAAKSSTLA HQSEHIFKAC
GLPVLFPSNV QEYLDFGLHG WAMSRYSGLW VALKCVTDVV ESSASVDIDP HRTEIVLPTD
FILPEGGLNI RWPDPPLVQE ARLLDYKWYA ALAYVRANKL DRIEIDSPTA RFGIMTGGKA
YLDVRQALSD LGLDDETCAR IGIRLYKVGC VWPLEAQGAQ AFARGLDEIL VVEEKRQILE
YAIKEELYNW PDAQRPRVFG KFDEKDGAGG EWSVPMGNWL LPAHYELSPA IIAKAIATRL
EKFELPSDVR ARIAARLAVI NAKEMALAKP HVQTERKPWF CSGCPHNTST NVPEGSRAIA
GIGCHYMTVW MDRSTSTFSQ MGGEGVPWIG QAPFTDEKHV FANLGDGTYF HSGLLAVRAA
ISSKANITYK ILYNDAVAMT GGQPVDGVLT VPQITHQLAS EGAKKIVIVT DEPEKYDDQK
ALLAPGVTIH HRDQLDDVQR ELREIEGTTI LIYDQTCATE KRRRRKRGTY PDPAKRVVIN
DAVCEGCGDC SVQSNCLSVE PLETEFGTKR QINQSSCNKD FSCLKGFCPS FVTVEGGQLK
KPKAVSVDGG ALPPIPEPAL PAIDRAYGVL VTGVGGTGVV TIGALLGMAA HLENKGVTVL
DVTGLAQKGG AVMSHVQISH APTDIHATRI AMGEADLVIG CDAIVTAGDE CTSRMRHDTT
RVVVNSAQTP TAEFIKNPNW AFPGVSAEND IRAAAGSAVD FIDANRFAVA LLGDAIYTNP
FVLGYAWQKG WLPLTLASLE RAIELNAVSV EKNRAAFDWG RRAAHDLASV KQAAAGDARP
VQGATVIALH TKKAVDALIA KRVEFLTAYQ NAAYAARYAA FVDRVRAAER ALADGDAVQE
PLTEAVARNL FKLMAYKDEY EVARLQSDPA FLARLSSQFE GDWKLKFHLA PPLFAKTDAH
GHLVKKAYGP WMMSAFRLLA KAKFLRGTGL DPFGRTEERR TERALIGEYE ALIGEVTAKL
NAANRPLALE LAALPDGIRG YGHVKENNLR AVRQKWNTLL AQWRSPTAGQ TSQQVA
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