| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0231 |
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| Symbol | |
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| ID | 6176212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 266387 |
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| End bp | 267592 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641679967 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001806948 |
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| Protein GI | 172059296 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000683509 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCCGACC ACAATCTGGA CAAACTGAAA ATCGACCGGC GTCCGATCGC GCCCGCGCCT
CGCCGGCGCC GGTGGGTCCG CTATGCGGTC GCCGCCGTGC TCGTGATCAT CGCGATCGCA
GCCGCGCTGG CGCTCACCGG CCGCCCGACG GTCGACACGA CCTCCGTCAC GTCCGCGTAT
CCATACCAGA ACGACACCCA GCTCAATGCG ACCGGCTACG TCGTGCCGCA GCGCAAGGCC
GCGGTCGCGT CGAAGGGCCA GGGGCGCGTC GAATGGCTCG GCGTGCTCGA AGGCACGCGC
GTGAAGAAGG GCGAGATCAT CGCGCGGCTC GAAAGCCGCG ACGTGGAAGC CTCGCTGGCT
CAGGCCCGCG CGCAGGTGCT GGTGTCCCGC GCGAACCTCG GCGTCGCGCA GGCGGAACTG
AAGGACGCGC AGATCGCGCT GCGCCGCACC GCCGTGCTCG CCCCGAAGGG CGCGGTGCCG
GCCGCCCAGC TCGACACCGA CACGGCCCGC GCGAACAAGG CGCGCGCGAC GCTCGGCAGC
GATCAGGCCG CGATCGCGTC CGCCGAAGCG AACGCGCAAG CCGCGCAGGT CGCGGTCGAC
CAGACGGTGA TCCGCGCGCC GTTCGACGGA ATCGTGCTCG CGAAGCATGC GAACGTCGGC
GACAACATCA CGCCGTTCTC GTCGGCGTCG GACAGCAAGG GCGCCGTCGT GACGATCGCC
GACATGGACA CGCTCGAGGT CGAGGCGGAC GTCGCGGAAT CGAACATCGC GAAGATCCGC
GCGGAGCAGC CCTGCGAGAT CCAGCTCGAC GCGCTGCCCG ACATGCGCTT CGCGGGCCGC
GTGTCGCGCA TCGTGCCGAC CGTCGACCGC TCGAAGGCGA CGGTGCTCGT GAAGGTGCGC
TTCGTCGACC GCGACGAGCG GGTGCTGCCC GACATGAGCG CGAAGATCGC GTTCCTGTCG
AAGCCGGCGT CGGCGCAGGA CCGGCAGCCG GTGACGGCCG TGCAGGCGAG CGCCGTGGTG
GAGCGCGACG GCCGGCCGGT CGTATTCGTC GTTAAGGACG ACACCGTACA CGCAACCGCG
GTGACGACCG GCACGCGGAT CGGCGAACTC GTCGCGATCC GCGGCGTGAA GCCCGGCGAC
ACGGTCGTGC TCGCGCCGGG CGCGAAGCTG AAGGACGGCG CGAAAGTGAC CGTCGCGAAG
AAGTAG
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| Protein sequence | MPDHNLDKLK IDRRPIAPAP RRRRWVRYAV AAVLVIIAIA AALALTGRPT VDTTSVTSAY
PYQNDTQLNA TGYVVPQRKA AVASKGQGRV EWLGVLEGTR VKKGEIIARL ESRDVEASLA
QARAQVLVSR ANLGVAQAEL KDAQIALRRT AVLAPKGAVP AAQLDTDTAR ANKARATLGS
DQAAIASAEA NAQAAQVAVD QTVIRAPFDG IVLAKHANVG DNITPFSSAS DSKGAVVTIA
DMDTLEVEAD VAESNIAKIR AEQPCEIQLD ALPDMRFAGR VSRIVPTVDR SKATVLVKVR
FVDRDERVLP DMSAKIAFLS KPASAQDRQP VTAVQASAVV ERDGRPVVFV VKDDTVHATA
VTTGTRIGEL VAIRGVKPGD TVVLAPGAKL KDGAKVTVAK K
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