Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0195 |
Symbol | flhA |
ID | 6176303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 229945 |
End bp | 232047 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641679930 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001806912 |
Protein GI | 172059260 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.107813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC CGACCACCGG CCTGTTCGCC AAACGCACGA ACCCGTTCGC GGGCGCCAAC CTGCGCGGGC TCGCGGGCCC GATCCTCATC TGCATGATCC TGGGGATGAT GATCCTGCCG CTGCCGCCGC TGCTGCTGGA TCTGCTGTTC ACCTTCAACA TCGCGCTGTC GGTGATGGTG CTGCTCGTCA GCATGTACAC GATGAAGCCG CTCGACTTCG CGGCGTTCCC GAGCGTGCTG CTGTTCTCGA CGCTGTTGCG CCTGTCGCTG AACGTCGCGT CGACGCGCGT CGTGCTGCTC GAGGGCCACA CCGGCCCCGA CGCGGCCGGC CAGGTGATCG AGGCGTTCGG CCACTTCCTC GTCGGCGGCA ACTTCGCGGT CGGCATCGTC GTGTTCGTGA TCCTGATGAT CATCAACTTC ATGGTGATCA CGAAGGGCGC GGGGCGGATC GCCGAAGTGT CCGCGCGCTT CACGCTCGAC GCGATGCCCG GCAAGCAGAT GGCGATCGAC GCCGACCTGA ACGCGGGCCT CATCAACGAG GAGCAGGCAC GCAAGCGCCG CCTGGCCGTG TCGCAGGAGG CCGAGTTCTA CGGGTCGATG GACGGCGCGT CGAAGTTCGT GCGCGGCGAC GCGATCGCGG GCCTGATCAT CATGGCGATC AACGTGATCG GCGGGCTGAT CGTCGGGATG GTGCAGCACG ACATGAGCTT CGCGGCGGCC GGCACCAACT ACACGCTGCT GACGATCGGC GACGGCCTAG TCGCGCAGAT CCCGTCGCTC GTGATCTCGA CGGCGGCCGG CGTGATCGTG TCGCGCGTGG CGACCGACGA GGACATCGGC ACGCAGATCA CCGGCCAGCT GTTCACGAAC CCGCGCGTGC TGAACATCAC CGGCGCGATC ATCGTGCTGA TGGGGCTGAT CCCCGGCATG CCGCACTTCG CGTTCCTCGC GCTCGGCGCC GGCGCGATCT GGCTGGCCCG CACGCAGAGC CGCCGCGCGG CCGCTCGCCT TGCCGCCGGC GACGTGACCG AGGTCGCGCC GCCCGCCGCG TTGCCGGGCG ACAGCCACGA GGCGACCTGG GACGACGTGC AGCTGATCGA CCCGCTCGGC CTCGAAGTCG GCTACCGGCT GATTCCGCTC GTCGACAAGA ACAGCGACGG CGAACTGCTC AAGCGCATCA AGAGCATCCG CAAGAAATTC GCGCAGGAAA TCGGCTTCCT GCCGCCGGTG ATCCATATCC GCGACAACCT CGAGCTGCGG CCGAACGCGT ACCGGATCGC GCTGAAGGGC GTGGAGATCG GCGCGGGCGA AGTGTTCCCC GGCCAGTGGC TCGCGATCAA CCCGGGCCAG GTGACTGCCG CGCTGCCGGG CGCCGCGACG CAGGACCCGG CGTTCGGGCT GCCGGCCGTG TGGATCGACG TCGCGATGCG CGAGCAGGCG CAGGTGTACG GCTACACGGT GGTCGACGCG AGCACGGTCG TCGCGACGCA CCTCAACCAT CTGGTCGTCC AGCACGCGGC CGAACTGCTC GGCCGCCAGG AAGTGCAGGC GCTGGTCGAG CGCACCGGCA AGGATGCGCC GTCGCTCGTC GAGGACCTCG TGCCGAAGAC GATCTCGCTC ACGACCCTGC AGAAAGTGCT GCAGAACCTG CTCGAGGAAG GCGTGCCGAT CCGCGACATG CGCACGATCC TCGAGGCCGT GTCCGAACAC GCCGGCCGCG GCGACGCGTA CGAGATCACC GCCGCGGTGC GGCTGTCGCT CGGCCGCGCG ATCACGCAGC AGTGGTATCC GGGCGCGGGC GAGATGCAGG TGATGGGCCT CGATTCGAAT CTCGAGCGCG TGCTGTCGCA GGCGCTCGCC ACCGGCGCGA ACCCGGGCCT CGAGCCCGGC CTCGCGCACA ACCTTCTGAC CGGCACGCAA CAGGCGATGC TGCGTCAACA GAATCTCGGG CTGCCGCCCG TGCTGCTGGT GCAGCACGCG CTGCGCGCGA TGCTCGCGCG TTTCCTGCGC CGCAGCCTGC CGCAACTGAA AGTGCTGTCG TACGCCGAAG TGCCGGACAC ACGCACGATC AAAGTCGTTA ACGTCATCGG GGGTTCCGCT TGA
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Protein sequence | MSTPTTGLFA KRTNPFAGAN LRGLAGPILI CMILGMMILP LPPLLLDLLF TFNIALSVMV LLVSMYTMKP LDFAAFPSVL LFSTLLRLSL NVASTRVVLL EGHTGPDAAG QVIEAFGHFL VGGNFAVGIV VFVILMIINF MVITKGAGRI AEVSARFTLD AMPGKQMAID ADLNAGLINE EQARKRRLAV SQEAEFYGSM DGASKFVRGD AIAGLIIMAI NVIGGLIVGM VQHDMSFAAA GTNYTLLTIG DGLVAQIPSL VISTAAGVIV SRVATDEDIG TQITGQLFTN PRVLNITGAI IVLMGLIPGM PHFAFLALGA GAIWLARTQS RRAAARLAAG DVTEVAPPAA LPGDSHEATW DDVQLIDPLG LEVGYRLIPL VDKNSDGELL KRIKSIRKKF AQEIGFLPPV IHIRDNLELR PNAYRIALKG VEIGAGEVFP GQWLAINPGQ VTAALPGAAT QDPAFGLPAV WIDVAMREQA QVYGYTVVDA STVVATHLNH LVVQHAAELL GRQEVQALVE RTGKDAPSLV EDLVPKTISL TTLQKVLQNL LEEGVPIRDM RTILEAVSEH AGRGDAYEIT AAVRLSLGRA ITQQWYPGAG EMQVMGLDSN LERVLSQALA TGANPGLEPG LAHNLLTGTQ QAMLRQQNLG LPPVLLVQHA LRAMLARFLR RSLPQLKVLS YAEVPDTRTI KVVNVIGGSA
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