| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0182 |
|---|
| Symbol | |
|---|
| ID | 6177243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 216239 |
|---|
| End bp | 218470 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641679917 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001806899 |
|---|
| Protein GI | 172059247 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTCG ACATCACGCA GTTCTACCAG ACCTTTTTCG ACGAAGCCGA CGAGCTGCTC
GCGCAGATGG AGCAGTTGCT GCTGAACCTC GACGTCGGCT CGCCCGACCC CGAGGACCTG
GCCGCGATCT TCCGCGCCGC GCACTCCATC AAGGGCGGCG CCGCGACGTT CGGCTTTTCC
GCGCTGACCG AGACGACTCA CATCCTGGAG TCGCTGCTCG ACCGGGCCCG CAACCATGAG
CTGACGCTGA CCAAGGAAAT GGTCGACGCG TTCCTCGAGA CCAAGGACGT GCTGTCCGAC
CAGCTGGTCG ACTATCGCGC GAGCGCGGAA CCGGACGCGG CGGCCGCCGC GACGATCTGC
GCGAAGCTCG AACGCCTGAA GGCCGAGAGC GGCGCGGGTG CGCCCGCGGC CGCCGACGTC
GCGCCGGCCG CGCCCGCCGT GGCGGCTGCA CCGGCGCCGG CACCGGCCGC CGGCAGCAAC
GGCGCGCCCG ATCACGTGGT CGAACAGGCG GTCGCCGCCG CGCATCCGGC GGCCGACGTC
GGCGCGGACG GCCCGCACCT GAAGATCACG CTCGTCGGCG TCGACCCGAA GGACCAGGCG
CTGCTCACCG AGGAACTCGG CAATCTCGGC CGGATCGTCG GCCGTGAGGA AGCGGGCGCC
GATCTCACGC TGTGGCTCGA ATCGGACGTG TCGTCCGATG ACATCACTGC CGTGTGCTGT
TTCGTGATCG ACGACAGCCA GATCCGCATC GCGCGCGGCA CCGCGCCGGC CGCACCGGCG
GCGCCTGCCG CCGCGCCGGC CGAATCGTTA GCCACGCCGG CAGCCGCGCC GGAGCCGGCC
GCGCGGGTCG AGGTGTTCGC GCAAGCCCCC GGTGCCGCAC CGGCCGCCGC CGCACCGCAG
GCCCAGCCGA GCGCCGCCGC GCAACCGGCG CCGCAGCCGG CCCAGCAACC GCACGCCGAA
CCCGCGGCGC CGGCCGCCGT GCATCACGAC GACAAGCGTC CGCGCCCGGC TGCCGCCGCA
GCGGGCGCCG AAGGCAGCTC GATCCGGGTC GGCGTCGAGA AGGTCGACCA GCTGATCAAC
CTGGTCGGCG AACTGGTGAT CACGCAGGCG ATGCTCGCGG AAACCGCGAG CGCGTTCGAT
CCGGCGCTGC ACGACCGCCT GTTCAACGGG ATGGCGCAGC TCGAGCGCAA CGCGCGCGAC
CTGCAGGAAG CGGTGATGTC GATCCGCATG ATGCCGATGG ACTACGTGTT CAGCCGCTTC
CCGCGGCTCG TGCGCGACCT GGCCGGCAAG CTCGGCAAGC AGGTCGAGCT CGTCACGTTC
GGCCAGGCGA CCGAGCTCGA CAAGAGCCTG ATCGAGCGGA TCATCGACCC GCTCACGCAC
CTCGTGCGCA ACAGCCTCGA TCACGGGATC GAAACCGTCG ACAAGCGCAT CGCCGCCGGC
AAGGACGCAG TCGGCCAGCT CGTGCTGTCG GCCGCGCATC ACGGCGGCAA CATCGTGATC
GAGGTCAGCG ACGACGGCGG TGGCCTGAAC CGCGAGCGGA TCCTCGCGAA GGCGGCGAAG
CAGGGCATGC AGGTGTCCGA CAACATCAGC GACGACGAAG TCTGGCAGCT GATCTTCGCG
CCGGGCTTCT CGACCGCCGA GACCGTGACC GACGTGTCGG GCCGCGGCGT CGGGATGGAC
GTCGTGAAGC GCAACATCCA GTCGATGGGC GGCCACGTCG AGATCTCGTC GCAGGCCGGG
CGCGGCACGA CCACGCGGAT CGTGCTGCCG CTCACGCTCG CGATCCTCGA CGGGATGTCG
GTGAAGGTCG GCAGCGAAAT CTTCATCCTG CCGCTGAACT TCGTGATGGA GTCGCTGCAG
CCGTCGAACG ACGATATCTA CACGGTCGGC AACGGCGAGC GCGTGGTGCG CGTGCGCGGC
GAATACCTGC CGCTCGTCGC GCTGCACGAA GTGTTCTCGG TCGAGGACGC GCGCACCGAT
CCGACCCAGG GCATCGTCAC GATCATGGAA ACCGAGGGGC GCCGCTTCGC GATGCTGATC
GACGAGCTGG TCGGCCAGCA GCAGGTGGTC GTGAAGAACC TCGAAACCAA CTACCGCAAG
GTGCACGGCA TCTCGGCGGC GACCATCCTC GGCGACGGCA GCGTCGCGCT GATCGTCGAC
GTCGCGGCGC TGAACCGCGA AACCCGTGCG ATGCACGGCG CCCGAGTGGG CGCCGAGCTC
GCGATCTTCT GA
|
|---|
| Protein sequence | MTLDITQFYQ TFFDEADELL AQMEQLLLNL DVGSPDPEDL AAIFRAAHSI KGGAATFGFS
ALTETTHILE SLLDRARNHE LTLTKEMVDA FLETKDVLSD QLVDYRASAE PDAAAAATIC
AKLERLKAES GAGAPAAADV APAAPAVAAA PAPAPAAGSN GAPDHVVEQA VAAAHPAADV
GADGPHLKIT LVGVDPKDQA LLTEELGNLG RIVGREEAGA DLTLWLESDV SSDDITAVCC
FVIDDSQIRI ARGTAPAAPA APAAAPAESL ATPAAAPEPA ARVEVFAQAP GAAPAAAAPQ
AQPSAAAQPA PQPAQQPHAE PAAPAAVHHD DKRPRPAAAA AGAEGSSIRV GVEKVDQLIN
LVGELVITQA MLAETASAFD PALHDRLFNG MAQLERNARD LQEAVMSIRM MPMDYVFSRF
PRLVRDLAGK LGKQVELVTF GQATELDKSL IERIIDPLTH LVRNSLDHGI ETVDKRIAAG
KDAVGQLVLS AAHHGGNIVI EVSDDGGGLN RERILAKAAK QGMQVSDNIS DDEVWQLIFA
PGFSTAETVT DVSGRGVGMD VVKRNIQSMG GHVEISSQAG RGTTTRIVLP LTLAILDGMS
VKVGSEIFIL PLNFVMESLQ PSNDDIYTVG NGERVVRVRG EYLPLVALHE VFSVEDARTD
PTQGIVTIME TEGRRFAMLI DELVGQQQVV VKNLETNYRK VHGISAATIL GDGSVALIVD
VAALNRETRA MHGARVGAEL AIF
|
|---|
| |