| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0176 |
|---|
| Symbol | |
|---|
| ID | 6178140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 210875 |
|---|
| End bp | 211939 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641679911 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001806893 |
|---|
| Protein GI | 172059241 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTG CCCAGATCGC GCCGCTTTAC GAAGCTGTCC CGCCGAAACT CTACGGCGGC
ACCGAGCGTG TCGTGTCCTA CCTCACCGAG GCGCTCGTCG AGCTTGGCCA CGATGTGACG
CTGTTCGCCA GCGGCGACTC CGTGACGTCG GCCCGTCTCG AGGCGGCATG GCCGCGCGCA
CTGCGGCTCG ACCCGTCGAT CCGCGATTCG ATGGCGCCCC ATATGCGCCT GATCGAGCAG
GTCGCGCGGG TCGCGCATGA ATTCGACGTG CTGCACTTCC ACCTCGACTA CCTGCCGTTC
TCGCTGATGT CGCGCCTCGA CACGCCGTAC GTGACGACGC TGCACGGCCG CCTCGACCTG
CCGGAGCTGC AGCCGGTGTT CGACGCGTTC CCGGACGCGC CGGTCGTCTC GATTTCGAAT
TCGCAGCGCA AGCCGCTGCC GCAGGCCGCG TGGGCCGGTA CCGTGTATCA CGGGCTGCCC
GACACGCTGC TCACGCCGCA ACCGGACGTG AAGCCCGAAT ACCTCGCGTT CCTTGGCCGG
ATCTGTCCCG AAAAGCGGGT CGACACCGCG ATCCGGATCG CCGCGAAAAG CGGGCTGCCG
CTGAAGATCG CCGCGAAGGT CGACAAGGCC GATGCCGACT ACTTCAAGGA AGTGATCGAG
CCGCTGCTCG GCGAGGCGCA TGTCGAATTC ATCGGCGAGA TCAACGAGGC GCAGAAGCCG
GCGTTCCTGT CCGGCGCGAA GGCGCTGCTG TTCCCGATCG ACTGGCCGGA GCCGTTCGGC
CTGGTGATGA TCGAGGCGAT GGCCTGCGGC ACGCCGGTCG TCGCGTTCAA CCGCGGCTCG
GTGCCGGAAG TGATCGAGGA CGGCGTGACG GGCTTCATCG TCGAGGACGT GCAGGGCGCG
GTCGGTGCGC TGCACCGGAT CGACAGCCTG TCGCGCGACG CGATCCGCGC CCGCTTCGAT
ACGCGTTTCA GCTCGAAAGC GATGGCGCGA CGTTACGTCG AAACTTACGA ATCGCTTTGC
ACGGCGGCAA AACGGCCGAC CTTGCGCCAG GTCGCGGGCG CCTGA
|
|---|
| Protein sequence | MRIAQIAPLY EAVPPKLYGG TERVVSYLTE ALVELGHDVT LFASGDSVTS ARLEAAWPRA
LRLDPSIRDS MAPHMRLIEQ VARVAHEFDV LHFHLDYLPF SLMSRLDTPY VTTLHGRLDL
PELQPVFDAF PDAPVVSISN SQRKPLPQAA WAGTVYHGLP DTLLTPQPDV KPEYLAFLGR
ICPEKRVDTA IRIAAKSGLP LKIAAKVDKA DADYFKEVIE PLLGEAHVEF IGEINEAQKP
AFLSGAKALL FPIDWPEPFG LVMIEAMACG TPVVAFNRGS VPEVIEDGVT GFIVEDVQGA
VGALHRIDSL SRDAIRARFD TRFSSKAMAR RYVETYESLC TAAKRPTLRQ VAGA
|
|---|
| |