| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0145 |
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| Symbol | gcvT |
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| ID | 6179059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 170278 |
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| End bp | 171396 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641679880 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_001806863 |
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| Protein GI | 172059211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.731192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAC TGAATCACAC CCCGCTCAAC GCCGCGCATC GCGCGCTCAA TGCCCGCATG
GTCGATTTCG GCGGCTGGGA CATGCCCGTC AACTACGGCT CGCAGATCGA AGAACACGAA
GCCGTGCGCA CCGACGCCGG CATGTTCGAC GTGTCGCACA TGTGCGTCGT CGATTTCACC
GGCAGCCGCG TGCGCGCGTT CTTCGAGCAC GCGATCGCGA ACAACGTCGG CAAGCTCAAG
ACCCCCGGCA AGGCGCTCTA CTCGTGCCTG CTCAATCCGC AGGGCGGCGT CATCGACGAC
CTGATCGTCT ATTACTTCAC CGAAGACTTC TTCCGCGTCG TCGTCAACGC CGGCACGGCC
GAGAAGGACA TCGCGTGGTT CAACCAGCTC AACGAGCAAG GCGGCTACGG CCTGACCATC
GCGCCGCGCC GCGATTTCGC GATCGTCGCC GTGCAGGGCC CGAACGCCCG TGAAAAGGTC
TGGACGACGG TGCCCGCCGC GCGCGCCGCC ACCAGCGAAC TGAAGCCGTT CAACGCCGCG
CGGGTCGCCG GCACGCCGTT CGGCGAGCTC ACCGTCGCGC GCACCGGCTA CACCGGCGAA
GACGGCTTCG AAGTGATCGT CCCGGCCGTG CACGTCGAAG CGCTGTGGAC CGCGCTGCAG
CAAAACGGCG TGCGCCCGTG CGGGCTCGGC GCGCGCGACA CGCTGCGCCT CGAGGCCGGC
ATGAACCTGT ACGGCCAGGA CATGGACGAG ACCGTGTCCC CGCTCGACGC GGGCCTCGCA
TGGACGGTCG ACCTGTCGGC ACCGCGCGAC TTCGTCGGCC GTGACGCGCT CGAGCGCGAC
GGCACGCGCG CCGCGTTCGT CGGCCTGATC CTGCAAAAGG AAAACGGCAA GGCGGGCGGC
GTGCTGCGCG CGCACCAGAA GGTCGTCACG CCGCACGGCG AAGGCGAGAT CACGAGCGGC
ACGTTCTCGC CGTCGATGCA GGAATCGATC GCGTTCGCAC GCGTGCCAGC GGCCGTCCAC
GTCGGCGACA CCATACATGT GCAGATTCGA GACAAGCAAC TTCCCGCGCG CGTGGTAAAA
CTGCCGTTCG TGCGCAACGG CAAGGTCCTC GCTGCGTAA
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| Protein sequence | MTALNHTPLN AAHRALNARM VDFGGWDMPV NYGSQIEEHE AVRTDAGMFD VSHMCVVDFT
GSRVRAFFEH AIANNVGKLK TPGKALYSCL LNPQGGVIDD LIVYYFTEDF FRVVVNAGTA
EKDIAWFNQL NEQGGYGLTI APRRDFAIVA VQGPNAREKV WTTVPAARAA TSELKPFNAA
RVAGTPFGEL TVARTGYTGE DGFEVIVPAV HVEALWTALQ QNGVRPCGLG ARDTLRLEAG
MNLYGQDMDE TVSPLDAGLA WTVDLSAPRD FVGRDALERD GTRAAFVGLI LQKENGKAGG
VLRAHQKVVT PHGEGEITSG TFSPSMQESI AFARVPAAVH VGDTIHVQIR DKQLPARVVK
LPFVRNGKVL AA
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