Gene BamMC406_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0124 
Symbol 
ID6176537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp143231 
End bp145801 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content72% 
IMG OID641679859 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001806842 
Protein GI172059190 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CGCAGCGTCC CCACGACCCA CGACACCGTC ATGCCGGCGG CGCCGCGACC 
TGCAGCGCCG ACGCGCGCGA CACGCAGGCG GCGACCGTTG CCGATGCGGG GCCGGCGGCC
GGCGAGCACG CGCATGGCGA CGCGGCAGCG CGCGGCGCGC AGCCGGATGG ATGCGGTCAC
AACCATGACC ACGATCACGC ATCGGCGCAT GGCACGGGGC ACGATCACGG CGACCACGCG
CATGGCGACG GGCATGCGCA CGGCGCTGCG TGCTCGCACG ACCATGCGGG GCATGACCAT
GCTGGTCACG ACCACGACCA CGACCACGAC CACGACCACG ACCACGACCA CGACCACGCC
GCCGGCGCCT GCTGCGCGCC TGCCGCGCTG ACGCTCGCGC CGCTGCCGGT CGCGCGGGCG
ACCGCATCGG GTCACGTGCG CTCCGCGTTC CGGATCATGC AGATGGACTG CCCGACCGAG
GAAACGCTGA TCCGCAAGAA GCTCGGCGGG ATGCAGCAAG TGTCGGCGCT CGAATTCAAC
CTGATGCAGC GGATGCTGAC CGTCGAACAC GTGCCGGGCG CGCAGCCCGC GATCGAAAGC
GCGATCCGCA CGCTCGGGAT GACGCCGGAG GCCGCTGCGG CCGACGTGCC GGCGACGCCC
GTCGCGCCGC CGCCCGCGAA GCCGTGGTGG CCGCTCGCGC TGGCCGGCGT CGCCGCGATC
GCATCCGAGG CCGTGAGCTG GGCCGGCTTG CCGATGTGGC TGTCGGCCGT GCTGGCGCTC
GCGGCCGTGC TCGCGTGCGG GCTGACCACC TACAAGAAGG GCTGGATCGC GATCCGCAAC
GGCAACCTGA ACATCAACGC GCTGATGAGC ATCGCGGTGA CGGGCGCGAT GGCGATCGGC
CAGTGGCCGG AAGCCGCGAT GGTGATGGTG CTGTTCACGA TCGCCGAGCT GATCGAGGCG
AAGTCGCTCG ACCGCGCGCG CAATGCGATC CAGGGCCTGA TGCAGCTCGC GCCGGACACC
GCGACCGTGC AGGGCGCCGA CGGCACGTGG CGCACGATCG AGGCCGCGCA GGTCGCGCTC
GGCGCGGTCG TGCGCGTGAA GCCGGGCGAG CGGATCGGGC TGGACGGCGA AGTCGTCGCG
GGCCGCTCGA CGGTGAACCA GGCGCCGATC ACCGGCGAGA GCCTGCCGGT CGACAAGACG
GCAGGCGATG CGGTGTACGC GGGCACGATC AACGAGGCCG GTTCGTTCGA CTATCGCGTC
ACGGCGGTTG CCGCCAACTC GACGCTCGCG CGGATCATCC ACGCGGTCGA GCAAGCGCAG
GGCGCGAAGG CGCCGACGCA GCGCTTCGTC GACCAGTTCG CCCGCGTCTA TACGCCGATC
GTGTTCGCGA TCGCGCTGCT GGTGGCGGTG GCGCCGCCGC TCGTGGTGGG CGGCGCGTGG
CATGACTGGA TCTACCGCGC GCTGGTGCTG CTCGTGATCG CGTGCCCGTG CGCATTGGTG
ATCTCGACGC CGGTGACGAT CGTGTCGGGG CTCGCGGCCG CGGCACGGCG CGGGATACTC
GTGAAGGGCG GCGTGTATCT GGAAGAAGGC CGCAAGCTCG CGTGGCTCGC ACTCGACAAG
ACCGGCACGA TCACGCACGG CAAGCCGGTG CAGACCGATT TCGACCTGCA TGCAACGGAC
GTCGACGCCG CACGCATACG CCACCTCGGC GCGAGCCTCG CGGCGCGCTC CGATCACCCG
GTGTCGCAGG CGATCGCCGC GGCGGCCCGC GACGCGCAGA CGGCGGCGTT CGCCGAGGTG
GATGGGTTCG AAGCGCTCGT CGGGCGCGGC GTGCGCGGCA CCATCGACGG CGCACGCTAC
TGGCTCGGCA ACCACCGGCT CGTCGAGGAG CTCGAGCGCT GCTCGCCCGC GCTGGAGGCG
AAGCTCGACG CGCTCGAGCG GCAGGGCAAG AGCGTCGTGA TGCTGGTCGA CGATACGCGC
GTGCTCGGCA TCTTCGCGGT GGCCGACACG ATCAAGGACA CCAGCCGCGC GGCGATCGCC
GACCTGCACG CGCTCGGCAT CCGCACCGCG ATGCTGACCG GCGACAACCC GCACACCGCG
CAGGCGATCG CGCAGCAGGC CGGCATCGAC GATGCGCGCG GCAACCAGTT GCCCGAGGAC
AAGCTCGCGG CGGTCGAGGA GCTGTCGGCG GGCGGCGCGG GCGCGGTGGG GATGGTCGGC
GACGGGATCA ACGACGCACC GGCGCTCGCG CGTGCCGACA TCGGCTTCGC GATGGGCGCG
ATGGGCACCG ACACGGCGAT CGAGACGGCC GACGTCGCGC TGATGGATGA CGACCTGCGC
AAGATTCCCG CGTTCGTGCG GCTGTCGCGC GCGACGCACC GCGTGCTGGT GCAGAACATC
GGCTTCGCGC TCGGCGTGAA GATCGTGTTC CTCGGCCTCA CGGTCGCCGG GCTCGGCACG
ATGTGGATGG CCGTGTTCGC CGACGCGGGC GCGAGCCTGA TCGTGGTCGG CAACGGGTTG
CGGCTGCTGT CGAAAACAGG TGTGTTCGAC AGCGCGCAGA CGCAGCGATG A
 
Protein sequence
MTDAQRPHDP RHRHAGGAAT CSADARDTQA ATVADAGPAA GEHAHGDAAA RGAQPDGCGH 
NHDHDHASAH GTGHDHGDHA HGDGHAHGAA CSHDHAGHDH AGHDHDHDHD HDHDHDHDHA
AGACCAPAAL TLAPLPVARA TASGHVRSAF RIMQMDCPTE ETLIRKKLGG MQQVSALEFN
LMQRMLTVEH VPGAQPAIES AIRTLGMTPE AAAADVPATP VAPPPAKPWW PLALAGVAAI
ASEAVSWAGL PMWLSAVLAL AAVLACGLTT YKKGWIAIRN GNLNINALMS IAVTGAMAIG
QWPEAAMVMV LFTIAELIEA KSLDRARNAI QGLMQLAPDT ATVQGADGTW RTIEAAQVAL
GAVVRVKPGE RIGLDGEVVA GRSTVNQAPI TGESLPVDKT AGDAVYAGTI NEAGSFDYRV
TAVAANSTLA RIIHAVEQAQ GAKAPTQRFV DQFARVYTPI VFAIALLVAV APPLVVGGAW
HDWIYRALVL LVIACPCALV ISTPVTIVSG LAAAARRGIL VKGGVYLEEG RKLAWLALDK
TGTITHGKPV QTDFDLHATD VDAARIRHLG ASLAARSDHP VSQAIAAAAR DAQTAAFAEV
DGFEALVGRG VRGTIDGARY WLGNHRLVEE LERCSPALEA KLDALERQGK SVVMLVDDTR
VLGIFAVADT IKDTSRAAIA DLHALGIRTA MLTGDNPHTA QAIAQQAGID DARGNQLPED
KLAAVEELSA GGAGAVGMVG DGINDAPALA RADIGFAMGA MGTDTAIETA DVALMDDDLR
KIPAFVRLSR ATHRVLVQNI GFALGVKIVF LGLTVAGLGT MWMAVFADAG ASLIVVGNGL
RLLSKTGVFD SAQTQR