| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0092 |
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| Symbol | |
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| ID | 6178869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 102872 |
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| End bp | 104656 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641679827 |
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| Product | ABC transporter related |
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| Protein accession | YP_001806810 |
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| Protein GI | 172059158 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.500773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TGGTACGCAA CAAGACCTTC TGGGTGTTTC TCGTGGTGCT GTTCGCGCTG
CCGGTTCTGC CCGGCGCGCT GCAGGTGCCC GAATACTGGA TCACGCTGCT GAACTACATC
GGCCTCTACG CGATCGTCGC GATCGGGCTC GTGTTGCTGA CGGGTGTCGG CGGGATGACG
AGTTTCGGGC AGGCCGCGTT CGTCGGCATC GGCGCGTATG CGACGGCGTT CCTGACGACG
CGATACGGCG TGTCGCCGTG GCTCGCGCTG ATCGTCGGCG TCGTGCTGAC GGCGCTCGTC
GCGCTCGTGC TCGGTGCGGT CACGATGCGG CTGTCCGGGC ACTTCCTGCC GCTCGGCACG
ATCGCGTGGG GCCTCGCGCT GTTCTATCTG TTTGGCAACC TCGAACTGCT CGGCAAGTAC
GACGGGATCA ACGGGATTCC GGCGCTGAAC CTGTTCGGCA TCGAGCTCGG TAGCGGCCGC
AGCCTGTACT TCCTGATCTG GGCCGTCGTG CTGGCGGCGA TCGTGTCGGT GCAGAACCTG
CTCAACAGCC GCCCCGGCCG CGCGATCCGC GCGTTGCGCG GCGGCGGTGT GATGGCGGAG
GCGATGGGCG TGGACACCGC ATGGATGCGC GTCGTGATCT TCGTCTACGC GGCCGTGCTT
GCCGCGGTAT CGGGCTTCCT GTACGCGCAC CTGCAGCGCG CGGTGAACCC GACCCCGTTC
GGGCTGAACC ACGGGATCGA ATTCCTGTTC ATGGCCGTGG TCGGCGGCGT GTCGCACGTA
TGGGGCGCGG TGCTCGGTGC GGCGATCCTC ACCGTGCTGC AGGACTACCT GCAGACGCTG
CTGCCGAAGC TGCTCGGCGC GGAAGGCAAC TTCGAGATCA TCGTGTTCGG CGTGCTGATG
GTGCTGCTGC TGCAGTACGC GCGCCAGGGC GTGTGGCCGT TCGTCGCGAA GCTGTTTCCG
CGCGGGCCGC GCGCCCATGT GCCCGACCAG GCCGATCCAC TGCCGCAGCG TGCGAAACCG
GTGGCCGGCG AGCCGCTGCT CGTCGTCGAC AACGCGCGCA AGCAGTTCGG CGGGCTGGTG
GCCGTCAACG ACGTCAGTTT CGACGTGAAG GCGGGGCAGA TCATCGGCCT GATCGGCCCG
AACGGCGCGG GCAAGTCGAC CACGTTCAAC CTCGTGACCG GCGTGCTGCA GCCGACCGGC
GGCACGATAA CGTTCCGCGG CGAGCGGATC GACGGGCTCA CATCGCGTCA GATCGTCCGG
CGCGGGATCG GCCGTACGTT CCAGCACGTG AAGCTGCTGC CGACGATGAC GGTGCTCGAG
AACGTCGCGA TCGGCGCGCA TTTGCGCGGC CGTACGGGCG TGTGGCGCAG CATCGCGCGG
CTCAACGCGC ACGAGGAGGC GCAACTGCTG GCCGAAGCAG CACGCCAGAT CCGCCGTGTC
GGGCTCGAAA AGCACATGTA CGACGAAGCG GGCAGCCTCG CGCTCGGACA GCAGCGGATT
CTCGAAATCG CCCGCGCGCT GTGCTGCGAC CCGACGCTGC TGCTGCTCGA CGAGCCGGCC
GCCGGGCTGC GCTACCAGGA GAAGCAGCAA CTCGCCGATC TGTTGCGGCG CCTGAAGGCC
GAAGGGATGA GCGTGTTGCT CGTGGAACAT GACATGGATT TCGTGATGAA TCTCACCGAC
CGGCTGGTGG TGATGGAATT CGGCACGCGG ATCGCGGAAG GGCTGCCGCA GGACGTGCAG
CAGGATCCGG CGGTGCTCGA AGCGTATCTG GGCGGGGTGG AGTGA
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| Protein sequence | MKTMVRNKTF WVFLVVLFAL PVLPGALQVP EYWITLLNYI GLYAIVAIGL VLLTGVGGMT
SFGQAAFVGI GAYATAFLTT RYGVSPWLAL IVGVVLTALV ALVLGAVTMR LSGHFLPLGT
IAWGLALFYL FGNLELLGKY DGINGIPALN LFGIELGSGR SLYFLIWAVV LAAIVSVQNL
LNSRPGRAIR ALRGGGVMAE AMGVDTAWMR VVIFVYAAVL AAVSGFLYAH LQRAVNPTPF
GLNHGIEFLF MAVVGGVSHV WGAVLGAAIL TVLQDYLQTL LPKLLGAEGN FEIIVFGVLM
VLLLQYARQG VWPFVAKLFP RGPRAHVPDQ ADPLPQRAKP VAGEPLLVVD NARKQFGGLV
AVNDVSFDVK AGQIIGLIGP NGAGKSTTFN LVTGVLQPTG GTITFRGERI DGLTSRQIVR
RGIGRTFQHV KLLPTMTVLE NVAIGAHLRG RTGVWRSIAR LNAHEEAQLL AEAARQIRRV
GLEKHMYDEA GSLALGQQRI LEIARALCCD PTLLLLDEPA AGLRYQEKQQ LADLLRRLKA
EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQDVQ QDPAVLEAYL GGVE
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