Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0073 |
Symbol | |
ID | 6178805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 83160 |
End bp | 84644 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641679808 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001806791 |
Protein GI | 172059139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCTG ATCCGGCTGT CACCACCAGC CTGCGCCGCT CGCTGCTCAG ACGCCTCGCC GCGCCGCTGT CGATGCTCGC GCTGATGAGC GGCCTGATTG CCTACTGGCT CGCGTGGCAA TACACGCAAC ACGTGATCGA CCGCTCGCTC GCCGATCTCG CGACCGCCAT CTCCAAACAG ATCCAGATCG CCGGCCCCGA CGCGCCGTTC ACGGTGCCGC CGCTCGCGCA GGCGATGTTC TCCGATCCGG CCGAGGCGCT GATCTACCGG ATCAGCGACG GCGAGGAGGA GCTCGCCGGC GATCCGAAGC TGCCGCTGCG CGGCATCAAC GTGCGCCGCA TGCATCACGC GTATGTGTTC GAGGCCGAGT ATGACAACCG CGCAGTGCGG GTCGCGCAGG TGCGCGTCGA GGAAGTCGAC GGCGGCCGGC CGATGGTGGT CGAGGTCGCG CAGCCGGTGC GGCACCGCTA CCGGATCGCC GCCGAATTCC TCGTCGCGAT CATGATGCCG CTGCTGCTGT TGCTGCTGGC GGGCTGGGGC ATCGTGTGGC GCGTCGTGAA CCAGCAGCTC GGCCCGCTCA CGCATCTCGC CGATTCACTG AACCGGCAGA CCCACACGTC GCTGGAGCCG GTCGACGAAA CCGACGTGCC GCTCGAGATC CGGCCGCTGA CGAGTGCGAT GAACGCGCTG CTCGGCCGCC TGAAGACCGC GCTCGACGCG CAGCGCAAGT TCATCGCCGA TGCCGCGCAC CAGTTGCGCA CGCCGCTCAC CGCCGTGAAG CTGCATGCCG AGCAGGCCGC CGTCGCGCGC GACCCGCAGC AGACCTACGC CGCGGTGCGC GAGCTGCGCG CGGCCGCCGA CCGCGCGGTG CGGCTGTCGA ACCAGTTGCT GTCGCTCGCG CGGGCGGAGC CGGGCGAACA GGCCGCGCGT TTCGTCGACG TCGACCTCGC CGCGATGGCA TTCGAGACAG GTGCCGAATG GGTGCCGCGC GCGCTCGCGG CGCATGTCGA CCTCGGCTTC CAGCGCAGCG ACGAACCCGA CGAAGACGAA ACGCTGAACG TGCGCGGCAA CCCCGTGCTG CTGCGCGAGG TGATCGCGAA CCTGCTCGAC AATGCGTTGA AATACGTGCC GCTCGCACGC CCGGACGGGG CGCGAATCAC GGTGAACGTC GCGCGCGGCG CGCTCGAGGG CGGCCAGCCG GCCGCCGAGA TCGTCGTCGA GGACAACGGC CCGGGCGTGC CGGCCAGTCA GCAGGCCGAC CTGTTCAAGC GCTTTTTCCG CGGCGATGCG CAAAGCGGCA ACGGCGTCGA GACGGGCGCC GGGCTGGGGC TCGCGATCGT CCACGACATC ATCGCGATGC ACGGCGGCAC GGTGTCGTAC GAGGATGCAT CGGAAGGCGG TTCGCGCTTC GTCGTGCGCG TGCCGCTCGC CAAGCGTACC GAGAAGCCGG CGAGCGAAAC GCCGGCCGCC GCGCCGACGC ACTGA
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Protein sequence | MSSDPAVTTS LRRSLLRRLA APLSMLALMS GLIAYWLAWQ YTQHVIDRSL ADLATAISKQ IQIAGPDAPF TVPPLAQAMF SDPAEALIYR ISDGEEELAG DPKLPLRGIN VRRMHHAYVF EAEYDNRAVR VAQVRVEEVD GGRPMVVEVA QPVRHRYRIA AEFLVAIMMP LLLLLLAGWG IVWRVVNQQL GPLTHLADSL NRQTHTSLEP VDETDVPLEI RPLTSAMNAL LGRLKTALDA QRKFIADAAH QLRTPLTAVK LHAEQAAVAR DPQQTYAAVR ELRAAADRAV RLSNQLLSLA RAEPGEQAAR FVDVDLAAMA FETGAEWVPR ALAAHVDLGF QRSDEPDEDE TLNVRGNPVL LREVIANLLD NALKYVPLAR PDGARITVNV ARGALEGGQP AAEIVVEDNG PGVPASQQAD LFKRFFRGDA QSGNGVETGA GLGLAIVHDI IAMHGGTVSY EDASEGGSRF VVRVPLAKRT EKPASETPAA APTH
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