| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0036 |
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| Symbol | |
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| ID | 6176113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 47269 |
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| End bp | 48051 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641679771 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001806754 |
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| Protein GI | 172059102 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCGG TTACCTACGC GCAGCTCAAC GGCTGGCTGA CCGCCTTCCT GTGGCCGTTC
GTGCGGATGC TCGCGCTCGT CGCGACGGCG CCCGTGGTCG GCCATGCCGC GGTGCCGGTG
CGCGTGAAGA TCGGCATCGC CGCGTTCATG GCGCTGGTCG TCGCGCCCAC GCTCGGCGCG
ATGCCGGACG TCACCGTGTT CTCGGCGCCG GGCATCTGGA TCGTCGTCAC GCAGTTCCTG
ATCGGCGTCG CGCTGGGCTT CACGATGCAG CTCGTGTTCG CGGCCGTCGA GGCGGCCGGC
GACTTCATCG GGCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGACCC GCATTCGAAC
GGCGCGACGC CGGTGATGGG CCGCTTCCTG AACGCGATCG CGATGCTCGC GTTCCTCGCG
GTGGACGGCC ACCTGCAGGT GTTCGCGGCG CTGGCCGCGT CGTTCCAGAC GCTGCCTGTG
TCGGGCGACC TGCTGCACGC GCCCGGCTGG CGCACGCTCG CCGCGTTCGG CGCGACGGTG
TTCGAGATGG GGCTGCTGCT CGCGCTGCCG GTGGTCGCGG CCCTGCTGAT CGCGAACCTC
GCGCTCGGGA TCCTGAACCG CGCGGCGCCG CAGATCGGCA TCTTCCAGAT CGGCTTTCCG
GTCACGATGC TGGTCGGGCT GCTGCTCGTG CAATTGATGA TCCCGAACCT CGTGCCGTTC
GTGTCGCACC TGTTCGACAT GGGGCTCGAT ACGATGGGGC GGGTGCTGAT CGGGTGGCGC
TAG
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| Protein sequence | MFSVTYAQLN GWLTAFLWPF VRMLALVATA PVVGHAAVPV RVKIGIAAFM ALVVAPTLGA
MPDVTVFSAP GIWIVVTQFL IGVALGFTMQ LVFAAVEAAG DFIGLSMGLG FATFFDPHSN
GATPVMGRFL NAIAMLAFLA VDGHLQVFAA LAASFQTLPV SGDLLHAPGW RTLAAFGATV
FEMGLLLALP VVAALLIANL ALGILNRAAP QIGIFQIGFP VTMLVGLLLV QLMIPNLVPF
VSHLFDMGLD TMGRVLIGWR
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