| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0020 |
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| Symbol | |
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| ID | 6176553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 29322 |
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| End bp | 30203 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641679755 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_001806738 |
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| Protein GI | 172059086 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.104667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG TCGATCCGGC CACGGGCAAT GCCGAAGACC GGGCCGACGC AGCGGCGAGC
TTCGACCCGC TGCGTCGCAC GCTGATTCGC GTCGCGTACC GGATGCTCGG TTCCGTCGCG
GACGCCGAGG ACATCGTGCA GGAGGCGTTC ATCCGCTGGA TGGACGTCGA TCGCACCGAG
GTGCGCGTGC CCGAGGCGTT CCTGCGCCGC ATGGTGATGC GCATGTGCCT CGATCAGTTG
AAGTCCGCGC GGCACCAGCG CGAGACCTAT ATCGGCCCAT GGCTACCCGA GCCGGTCGTC
GAGGAAGATG AACAGGAGGA CGTCACGCTG CCGCTGATGC TCGCGCTCGA ACGGCTGTCG
CCGCTGGAGC GCGCGGCGTT TCTGCTGCAC GACGTGTTCG GCCTCGAGTT CGACGAGATC
GCGACCACGA TTCAGCGCGA CCCGGCCGCA TGCCGGCAGC TCGCCGCGCG CGCACGCACG
CATGTGCGCG AGGCGCGGCC GCGGTTTCAT GTCGAGAAGC AGCGCGGGAT CGAGCTGGCC
GAGGCGTTCT TCGCGGCGTC CCGCAGCGGC GACATGCGTG CGCTCGGCGC GATGCTCGCC
GAGGACGTGA GCCTGCATTC GGACGGCGGC GGCAAGCGCG CGGCCGCGGG CAAGCCGGTG
TTTGGCTTCG AACGCGTGAT GAAGGTGCAC GAATACCTGG CCGAGTTGTT CGCCACGCAT
GCGTCGAAAC TCGTGCGCGC GGGGTTCATC AACGGGCTGC CTGGGTTCGT CACGCTGGAG
GCCGACGGCG AGCTGCAGAC GACCGCGCTC GACATCGACG ACGGGAAGAT CGTCGCGATC
TATGTCGTGC GCAATCCTGA CAAATTGAAG CATCTGCATT GA
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| Protein sequence | MTSVDPATGN AEDRADAAAS FDPLRRTLIR VAYRMLGSVA DAEDIVQEAF IRWMDVDRTE
VRVPEAFLRR MVMRMCLDQL KSARHQRETY IGPWLPEPVV EEDEQEDVTL PLMLALERLS
PLERAAFLLH DVFGLEFDEI ATTIQRDPAA CRQLAARART HVREARPRFH VEKQRGIELA
EAFFAASRSG DMRALGAMLA EDVSLHSDGG GKRAAAGKPV FGFERVMKVH EYLAELFATH
ASKLVRAGFI NGLPGFVTLE ADGELQTTAL DIDDGKIVAI YVVRNPDKLK HLH
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