Gene BURPS668_A3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A3234 
Symbol 
ID4887507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp3061053 
End bp3062345 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content65% 
IMG OID640133170 
Productouter membrane porin 
Protein accessionYP_001064225 
Protein GI126445189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.283288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCCG CGCGGGCGCG TAATCATATC CATCGCAGAA TTAATTGGTT TTCGGTTCGT 
TTTCCTGTCC GTATCGTTCA GCGATTCGAA CGACAAATCG ACCACGAGGA AAACCACCAC
ATGAAGCAAA CGAAGCATCT CGCCGCGCTC GCCGTGCCGG CCGGCTTTCT GCTGTCCGCG
GGCGCGCACG CGCAAAGCAG CGTCACGCTT TACGGGATCG TCGATGCGGG CATCGCCTAC
GTGCACAACG TCCAGGGCGC CGACGGCCGC AATGAGGCCT CGCTCTTCAA GTTCAGCAGC
GGCAACCTGT CCGGCAGCCG CTGGGGCCTG CGCGGCACCG AGGATCTGGG CGGCGGCCTC
GCCGCGCTGT TCCAGCTGGA AAACGGCTTC AACCTCGGCA CGGGGCAGCA GAACGGCAAT
CGCGAATTCG GCCGCAAGGC GATCGTCGGC CTCGCGAGCA ACACGTGGGG CAGCGTCACG
CTCGGCCGCC AGTACGATCC GGTCGTCGAT CTCGTACAGG GGCTCACCGA GGACAACTAC
TTCGGCGGCG TGTTCGCGAC ACCGGGCGAT CTCGACAACT ACGACAACAG CCTGCGCGTG
AGCAACTCGG TGAAATACAC GAGCCCGGTG CTGTCGGGCT TCCAGTTCGA AGCGCTGTAC
GGCTTCGGCG GCGTCGCGGG CGCGACGGGC AGCGGCCGCA CGTACAGCTT CGCCGCAAGC
TACGCGAACG GGCCGCTGTC GCTCGGCGCG GGCTACCTGT ACGCGGACGG CGGCGCGAAC
GCGACGAACG GCGTGCGCAC GTGGACGGGC AGCTCGGACA CGCTGTTCAA CACCGTGATC
AACCAGGGCT TCGCAAGCGC GAAGTCGATT CAGATCGTGC GCGCCGGCGG CCAGTACGTG
CTCGGCTCGG CGACGTTCGG CCTCGCGTAT TCGAACACGC AGTACCGCCG CGATTCGCTG
TCGGCATTCA GCGATACCGC GAAGTTCAAC AGCGGCTCCG CGTTCTTCAA CTATCAGTTC
TCGCCGGCGC TGCGCGCGGG CGTGGGCTAC AACTACACGT CGCTGACGGG GCCGGCTTCC
GCGCACTATC ATCAGGTGAA CCTCGGCGCG GGCTATGCAC TGTCCAAGCG CACCGATCTG
TACGCGCTGT TCGGCTATCA GAAGGCGAGC GGCCACACGC TCGGCGCGAA CGGCGCGGTG
ATCGACGCGC AGGCGTCCGT CGGCTCGTAT GGCGCGAACT CGGGCACCGA TTCGCAGGAA
CTCGCGATCG TCGGAATTCG GCACAAGTTC TGA
 
Protein sequence
MPAARARNHI HRRINWFSVR FPVRIVQRFE RQIDHEENHH MKQTKHLAAL AVPAGFLLSA 
GAHAQSSVTL YGIVDAGIAY VHNVQGADGR NEASLFKFSS GNLSGSRWGL RGTEDLGGGL
AALFQLENGF NLGTGQQNGN REFGRKAIVG LASNTWGSVT LGRQYDPVVD LVQGLTEDNY
FGGVFATPGD LDNYDNSLRV SNSVKYTSPV LSGFQFEALY GFGGVAGATG SGRTYSFAAS
YANGPLSLGA GYLYADGGAN ATNGVRTWTG SSDTLFNTVI NQGFASAKSI QIVRAGGQYV
LGSATFGLAY SNTQYRRDSL SAFSDTAKFN SGSAFFNYQF SPALRAGVGY NYTSLTGPAS
AHYHQVNLGA GYALSKRTDL YALFGYQKAS GHTLGANGAV IDAQASVGSY GANSGTDSQE
LAIVGIRHKF