Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A3226 |
Symbol | |
ID | 4886880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 3052277 |
End bp | 3053590 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640133162 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_001064217 |
Protein GI | 126444723 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.107526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGGC TGGGTTGCGT TGTTACCCGC TCACGAAAAA AGCCGTACGC TCGCGCGCCG CGCTCTTGTG CGGCGCGCGA GCGTGACGAG CGTGACGAGC GTGACGAGCG TGACGAGCGT GACGAGCGTG ACGAGCGTGA CGAGCGTGAC GAGCGTGACG AGCGTGACGA GCGTGACGTG CGGGACGTGC GTGACGTGCG TGACGTGCGT GACGTGCGGG ACGTGCGGGA CGTGCGGGAC ATGCGCCATG AGCGTGACAG GCGCGGCGCG CATGACGCGT GCGGCGCGGC GGCGCGACGC CCGGCAACTG CCATGCGTTG CGCCGCGAAG CGCACGTCGC GCCGAGCATG GGAAAACACG CACCGTCCGC GCCGTCGCAA CCGGTCGGCC CGAACACGTT TCGAACAACC CAAGGAACGG CCCTTGCGAC ATCCAGGCTC CAGGCTCACC CGGTTCCGGC TCGCGGCGGC GGCCTGCTGT CTCGCATTGG CAAGCGCCGC GCGCCCCGCG TTCGCCGGCG CGAACGCGCC CGCCGCCGCC GAGCCGCCCA CCGATGCGCA GCGCCCCGCG ATCCTCGTCT ATCACCGCTT CTCGTCGTCC GCGCCGCCCG ATTCGATGAC CGTGCGCGTC AGCACGTTCG GCGCGCAGCT CGCGTTCCTG CGCGCGCACG GTTACACGTT CGTACCGCTG CGCGACGTCG TCGCGTGGGC GGCTTCGCCG TCCGCGCCGC TGCCGGACAA GGCGATCGCG ATCACCGTCG ACGACGGCCA CCGCTCGGTG TACGAACTGC TGCGCCCGAT CGTGCTGCGC GAGCGGCTGC CCGTCACGCT GTTCATCTAT CCGTCCGCGA TCTCGAACGC GTCGTATGCG ATGACATGGG ACGAACTGCG CGCGTTGCGC GCCACCGGCC GCTTCGATAT CGAATCGCAC ACGTGGTGGC ATCCGAACTT CCGCACCGAG CGGCGGCGCC TCGCACCCGA TGCGTTCCGC CGCTTCGCCT CGACCCAGTT CACCCATTCG CGCGCGCGGC TCGAGCGCGA AATCGGCGGG CCGGTCGATC TGCTCGCATG GCCGTTCGGC CTCTACGACG ATGAGCTGAC GTCGCTCGCC GCGCAGGCGG GCTACGTCGC GGGCTTCACG CTCGACGCGC GCAAGGTTCG TCGCGGCGAC GCGCCGCTCG CGCTGCCGCG CTTGCTGATC GTCGACAGTT GCACGCCGGC CGTGCTGGCG CGGATGCTCG GCGAACGCGG CGACGCGCGT GCCGATTCGC ACGCCGATTT ACACGTCGAT TCACACGCGG AGCAATCGCG ATGA
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Protein sequence | MIRLGCVVTR SRKKPYARAP RSCAARERDE RDERDERDER DERDERDERD ERDERDERDV RDVRDVRDVR DVRDVRDVRD MRHERDRRGA HDACGAAARR PATAMRCAAK RTSRRAWENT HRPRRRNRSA RTRFEQPKER PLRHPGSRLT RFRLAAAACC LALASAARPA FAGANAPAAA EPPTDAQRPA ILVYHRFSSS APPDSMTVRV STFGAQLAFL RAHGYTFVPL RDVVAWAASP SAPLPDKAIA ITVDDGHRSV YELLRPIVLR ERLPVTLFIY PSAISNASYA MTWDELRALR ATGRFDIESH TWWHPNFRTE RRRLAPDAFR RFASTQFTHS RARLEREIGG PVDLLAWPFG LYDDELTSLA AQAGYVAGFT LDARKVRRGD APLALPRLLI VDSCTPAVLA RMLGERGDAR ADSHADLHVD SHAEQSR
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