| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3085 |
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| Symbol | |
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| ID | 4888586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 2924972 |
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| End bp | 2927044 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640133021 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_001064076 |
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| Protein GI | 126445563 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCA AACCGCAACT TTTCCGGCCG ACGCCGGCGC GCTCGCGCGC CGTGCGCGGC
GCGGCGCTCG CCGCCGCGTG CTGCGCCGGG CTCTTCACCG TCTTCGCCGC GGCCGCCCAG
GACGCCGTCG AAAACGCCGC GATCGCGAAA GGCACGGCCG CCGCGCCGAT GGCGCTCGGC
CGCGCGCCGA TGCAGATGAC GATCAGCATG GCGCCCGCGC CCGCCGCCGG CGCCGCCGCA
GCGGCCGCCG CCGTGCCGCT GCGCGGCCCG AACTGCGTCG GCGAGATGCG CGAGTCGACG
AGCGTGAGCG TGCCGCTCGG CAAATCGCTG CTCGTGCCGC TCGACGAGCC GGTGCGCAAC
CGCACGATCG GCAACCCCGC CGTCGCGCAG GCGACGATGG TGTCGCCGCG CACGCTCTAC
CTCGTCGGCA TGTCCGTCGG CACGACGAAC ATGATCGTTC AGGGCAAGAG CGGCGCGTGC
CGGATCATCG ATGTCGCCGT CGGCGCGGAC GCGGGCGGCC TGCAGGCGTC GCTGCGCCAG
TTGATGCCGC GCGAGCACGA CATCCGCGTG TCGACCGCGG CGGACACGAT CGTGCTCGCG
GGCAACGTGT CGAGCGCGCA GGCCGCGCAG CAGGCGGTCG CGATCGCGAA AGCGTACAGC
AACCGCACGA ACGCCGGCGC GGCCGGCAGC GGCGGCGGCA ACGGCGGCGG CGCGCGCGCC
GACGTGCTGA ACATGCTGAC CGTCACGTCG CCGCAGCAGG TGATGCTCGA AGTGAAGGTC
GCCGAGGTAT CGAAGACGCT GATCAACCAG ATGGGATCGG CCGTCAACAT CCAGGGCGGC
TTCGGCTCGT GGACGGGCGC GCTCGTGACG AGCCTGCTCA CGGGCGTGGG CAGCGGCATC
GCGGCGAGCA AGTCGAACAA GCTGCCGTTG AACGGCTCGA TCGACGCGCA GAACACCGAT
CAGCCGGTGA AGATCCTCGC CGAGCCGCGG CTCGTCACGA TCAGCGGCCA GGAAGCGACG
TTCCTCGCCG GCGGCAAGAT CTTCATTCCG GTGCCGCAGA GCAGCGGCAT CGGCACGAAC
ACGATCACGC TGCAGGAAGA GGAGTTCGGC GTCGGGCTGA AGTTCACGCC GACCGTGCTG
TCGAACGGCC GGATCAGCCT GAAGGTCGCG CCGGAGGTGT CCGAGCTGTC GCCGACGGGC
GTCACGCTGT CTGCGGCGAA CGTGGGCAAC GTGTCGATCC TGCCGCTCAT CACGACGCGG
CGCGCATCGA CGACCGTGCA GATGGGCGAC GGCGAGACGT TCGCGATCGG CGGGCTCATC
AAGGACAACG CGCAGGGCAC GCTCAAGGCG CTGCCCGGCA TCGGCGAGCT GCCGGTGCTC
GGCGCGCTGT TCCGCAGCAC GTCGTTCCAG CAGGACCGCA CCGAGCTCGT GTTCATCATC
ACGCCGCACC TGGTGCAGCC GCTCGAGACC GCCGACGTGC CGCTGCCGAC CGACAGCTTC
ACGAAGCCGA ACGAAGCCGA CGTCTATGCG ACGGGCAACA TGGAAGGCCG CGGCGGGCTG
CGTCAGCACG GCGCCGCGCC GGCCGCCGCG CCCGCGAATG CCGCGCCCGG CGCCGCCGCG
CCGACCGGTG CGGCGCCCGC CGCCGCCGTG CCTGCGCCTG CCGCGCCCGC GCCTGCCGCA
CCCGCCGCGG CGCCCGCCGC CGCAGCCGCG CCCGCGAAGG ACGCGGCTGC GAGCCCCGCG
CCGGCGAAGC AGGCGCCCAT CGCCGCGCAA GCGCCCGCGC CGCAGCCGGC GAAGCCCGCG
CCGGCGAACG CCCGCCCGCC GGCGACCGTG CAGGCGCCGC CGCCCGCACT GCCGTCCGCC
GCCGCGCTCG CGCAGCGGCA AGGCGCGCAC GCCGCCGCGC CGGACACGGC GCACGCCGGC
CCAGCCGAGA GCGCGGCGGC AACCGCGTCG CCCGCGCCGG CCGCCGCGCT CGCGGCCCCG
GCCGCCGCCG GCGCGACCGC GAAGCGCCAG GGCGCGCAGC CGCCGCAACA ACTCGCCAAC
GCAGGCGCGA TCGCGCCCGC CGCCGATCGC TGA
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| Protein sequence | MDTKPQLFRP TPARSRAVRG AALAAACCAG LFTVFAAAAQ DAVENAAIAK GTAAAPMALG
RAPMQMTISM APAPAAGAAA AAAAVPLRGP NCVGEMREST SVSVPLGKSL LVPLDEPVRN
RTIGNPAVAQ ATMVSPRTLY LVGMSVGTTN MIVQGKSGAC RIIDVAVGAD AGGLQASLRQ
LMPREHDIRV STAADTIVLA GNVSSAQAAQ QAVAIAKAYS NRTNAGAAGS GGGNGGGARA
DVLNMLTVTS PQQVMLEVKV AEVSKTLINQ MGSAVNIQGG FGSWTGALVT SLLTGVGSGI
AASKSNKLPL NGSIDAQNTD QPVKILAEPR LVTISGQEAT FLAGGKIFIP VPQSSGIGTN
TITLQEEEFG VGLKFTPTVL SNGRISLKVA PEVSELSPTG VTLSAANVGN VSILPLITTR
RASTTVQMGD GETFAIGGLI KDNAQGTLKA LPGIGELPVL GALFRSTSFQ QDRTELVFII
TPHLVQPLET ADVPLPTDSF TKPNEADVYA TGNMEGRGGL RQHGAAPAAA PANAAPGAAA
PTGAAPAAAV PAPAAPAPAA PAAAPAAAAA PAKDAAASPA PAKQAPIAAQ APAPQPAKPA
PANARPPATV QAPPPALPSA AALAQRQGAH AAAPDTAHAG PAESAAATAS PAPAAALAAP
AAAGATAKRQ GAQPPQQLAN AGAIAPAADR
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