Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A3015 |
Symbol | oppF |
ID | 4886344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 2863087 |
End bp | 2864220 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640132951 |
Product | oligopeptide ABC transporter, ATP-binding protein OppF |
Protein accession | YP_001064006 |
Protein GI | 126442888 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.590802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CGACCGATCT CATTTCGTCC ACTTCGTCGT TCGTATCGGC ATCGGCGGGC GCGCCGGGCG GCGGCGAGGC CTCCGGCGCC GATGCGCCCG GCGCCGACGC GCGCGGTGGC GGCGCATCGC CGCATGCCGA CGCGCTGCTG TCGGTGCGCG ATCTCAAGGT GCATTTCCGC GTGCCGCTCG GCGGCTATCC GTGGTCGCCC AAGGGCACGC TGCGCGCGGT CGACGGCGTG TCGTTCGACG TGAAGCGCGG CGAGACCGTC GGGCTCGTCG GCGAATCGGG CTGCGGCAAG TCGACGCTCG CTCGCGCGCT GATCGGCCTC GCGCCGGTGA CGGCGGGCAC CGTGCAGTGG CGCGGCGTGC CGATCGTGAG CAGCGCGCGG CGCGACGCGC GCAGGATCCG CCGCGAAATG CAGATGATCT TTCAGGATCC GCTCGCGTCG CTTGATCCGC GCATGACGAT CGAGCAGGTC GTCGCGGAGC CGCTCGTCAC GCACCAGCCG GGCATCGGCC GCGACGAAGT GCGCCGCCGC GTGCTGACGA TGCTCGAGCG CGTCGGCCTG AGCGCCCACC ACCTGCTTCG TTATCCGCAC GAATTTTCCG GCGGGCAGTG CCAGCGCGTC GGCATCGCGC GCGCGTTGAT CGGTGAGCCG CATCTCGTGA TCTGCGATGA GCCCGTGTCC GCGCTCGACG TGTCGATTCA GGCGCAGATC GTCAATCTGC TGCGCGACCT GCAACGCGAG CTTTCGCTGT CCTATCTGTT CGTCGCGCAC GATCTCGCGG TCGTCAAGGC GATCAGCCAG CGCGTGCTCG TGATGTATCT CGGCCGCGTG ATGGAGTTCG GCACGCGCCG CGAAGTGTAC GGCGCGCCGC AGCACCCGTA CACGCGCGCG CTGCTCGCCG CCGCGCCGAC GCCGGAGCCC GCGCGCGAGC GCGCGCGCCG GCCGCTGTTG CTCGCGAGCG AAATGCCTTC ACCGCTCGAT CCGCCGTCGG GGTGCGCGTT TCGCACGCGC TGCCCGGACG CGATCGACGC GTGCGCGCGC GAGGTGCCGC AGCCCGAAGT GCGCGGCGTG ACGGGCGCGC GCGTCGCGTG CATTCGCGCG GGCACGGGCG GTGCGGCGCG CTGA
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Protein sequence | MSAATDLISS TSSFVSASAG APGGGEASGA DAPGADARGG GASPHADALL SVRDLKVHFR VPLGGYPWSP KGTLRAVDGV SFDVKRGETV GLVGESGCGK STLARALIGL APVTAGTVQW RGVPIVSSAR RDARRIRREM QMIFQDPLAS LDPRMTIEQV VAEPLVTHQP GIGRDEVRRR VLTMLERVGL SAHHLLRYPH EFSGGQCQRV GIARALIGEP HLVICDEPVS ALDVSIQAQI VNLLRDLQRE LSLSYLFVAH DLAVVKAISQ RVLVMYLGRV MEFGTRREVY GAPQHPYTRA LLAAAPTPEP ARERARRPLL LASEMPSPLD PPSGCAFRTR CPDAIDACAR EVPQPEVRGV TGARVACIRA GTGGAAR
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