| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A3005 |
|---|
| Symbol | |
|---|
| ID | 4887797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2856176 |
|---|
| End bp | 2857696 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640132942 |
|---|
| Product | sigma-54 dependent transcriptional regulator |
|---|
| Protein accession | YP_001063997 |
|---|
| Protein GI | 126443116 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000526118 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAAGA AAGAAAAAGT GGAGACGAAT GCACCGATTT CGGGCGGCTG GGTTCGGCTG
CCCGCCGATT ACGGCGACGT GCTGCGGCGC GCGGCGGAGT CGCTGTTCAA GACCTTCGAG
CACTCGAGCG TCGGCACGCT GATCGTCGAC AAGGATGCGC GCGTCGTCTG GATCAATCAG
CGTTACGCGG CGCGTTTCGG GTTCGCCGAT CCGCAGCAGG CGATCGGCCG CGATTGCGAA
GCGGTGATTC CGCACAGCCT GATGCGCGAG GTGGTCGCGA CCGGCCGCCC GATCCTGCTC
GACATCATGG AGACGGGCCG CGAGCCGCTC GTCGTCACGC GCCTGCCGCT GACGGACGAC
GCGGGCGAGA CCGTCGGCGC GATCGGCTTC GCGCTGTTCG ACGAGCTGAA GACGCTCACG
CCGCTCTTTT CGCGCTACAT GCAGGTCCAG CAGGAGCTGA TCGCGACGCA ACGCTCGCTC
GCGCAGGCGC GGCGGGCGAA ATACACGTTC GCGAGCTTCG TCGGCACGAG CGCGGTGAGC
CTCGAGACGA AGCGGCAGGG GCGGCGCGCC GCGCAGGTCG ATTCGCCGGT GCTGCTGCTC
GGCGAGACGG GCACCGGTAA GGAGCTGCTC GCGCATGCGA TCCACGCGGC GTCCGCGCGG
GCATTGAAGC CGCTCGTGAC CGTCAACGTC GCGGCGATTC CCGATGCGCT GCTCGAAACC
GAGTTCTTCG GCGCGGCGCC GGGCGCGTAC ACGGGCGCGG ATCGCAAGGG GCGCGTCGGC
AAGTTCGAGC TTGCCGACGG CGGCACGCTC TTTCTCGACG AAATCGGCGA CATGCCGGTG
CCGCTGCAGG GCAAGCTGCT GCGCGTGCTG CAGGACAAGG AGTTCGAGCC GGTCGGCTCG
AACCGGATCG TGCGCGCGAA TGTGCGGATC ATCGCGGCGA CGTCGGCCGA ATTGCCGGCG
CTCGTCGCGG AAGGGCGCTT TCGCGCGGAC CTTTATTACC GGCTGAACGT GCTGACGATC
CATGCGCCGC CGCTGCGCGA GCGCGCATCG GACATCGAGG CGCTCGTCTA CACGATGCTC
GAGGAACTCG CCGCGCAGCA TGGGCTGGCC GAGCACTGCG AACTGACCGA CGACGCGCTG
CGCCTGCTGT GCGCGTATCC GTGGCCCGGC AACGTGCGCG AACTGCGCAA CACGCTCGAG
CGCGCGCTGA TGCTGTCCGA TCGCGCGTTG ATCGATGCGC GCGCGCTCGC GCCGTTCATC
GGGCCGGCGC GCGGCGCGGG GGGCGGTGTC GGGGCGGGCG GCGTCGGTCC GGCCGCGGTC
GCCATCGCGG CGCAGACTGC CATGGCCGAT ACGCGCGCGG CGGCGTCATC CTATGCGGAC
GCATTCGCCG CGTGGGAGCG TCAATTCCTG ATCGACGCGC TTGCCGCGTC CAACGGCAAG
GTGACGGAAG CGGCCGCGCG CATCGGCATC GGGCGTGCGA CGTTCTACAA GAAGCTCGCG
ACGCTCGGCA TCGATACGTA G
|
|---|
| Protein sequence | MDKKEKVETN APISGGWVRL PADYGDVLRR AAESLFKTFE HSSVGTLIVD KDARVVWINQ
RYAARFGFAD PQQAIGRDCE AVIPHSLMRE VVATGRPILL DIMETGREPL VVTRLPLTDD
AGETVGAIGF ALFDELKTLT PLFSRYMQVQ QELIATQRSL AQARRAKYTF ASFVGTSAVS
LETKRQGRRA AQVDSPVLLL GETGTGKELL AHAIHAASAR ALKPLVTVNV AAIPDALLET
EFFGAAPGAY TGADRKGRVG KFELADGGTL FLDEIGDMPV PLQGKLLRVL QDKEFEPVGS
NRIVRANVRI IAATSAELPA LVAEGRFRAD LYYRLNVLTI HAPPLRERAS DIEALVYTML
EELAAQHGLA EHCELTDDAL RLLCAYPWPG NVRELRNTLE RALMLSDRAL IDARALAPFI
GPARGAGGGV GAGGVGPAAV AIAAQTAMAD TRAAASSYAD AFAAWERQFL IDALAASNGK
VTEAAARIGI GRATFYKKLA TLGIDT
|
|---|
| |