Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2918 |
Symbol | |
ID | 4888004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 2768855 |
End bp | 2770312 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640132854 |
Product | sphingosine-1-phosphate lyase |
Protein accession | YP_001063909 |
Protein GI | 126443077 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.216588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGACCG ACGTCGGCAC GGCGAAGGAG AACGTCATGG ATCTGGAGGA AGGCATCAGG CGGCTGTATC CGTATGCGGA GGAATTCGGC GTGATGCGCG GCTTCCCGGA ACAAGGAACG CCGCGCGACG AACTGCTCGC GCAGTTGCGC TCGATGGCCG AGCGCGAGGA TCGCAACTGG GAGAGCGGGC ATAGCTCGGG CGCGATGTAT TCCGGCGATC GCGACCATCA TGCATGGCTG AACGAAGCGT ATTCGGTCTT CAGTCACGTC AACGCGCTGC GGCGCGACCT GTGCCCGAGC ATGAACCGGA TGGAAAGCGA GATCGTCGGC ATGACGGTTG CAATGCTGCA CGGCGATGCG GTGGCCGCGC ACCACCCCGG GCAGCGCGCG TGCGGGATGA TCACGCTCGG CGGCACCGAG AGCATCCTGG GCGCGACGCT TGCGTATCGC GAGAAAGCGC GCGCCGAGCG CGGCATCGGG CGGCCGCGGA TGATCTGGCC GGCGTCCGCG CATCCGGTGT TTCGCAAGGC CGCGCATCTG TTCGGCTTCG ACGTGACCGT CGCGCCGGTC GATCCCGTCA CGATGCAGGT CGATGCCGAT TTCGTGCGCG ACGCGGTGGA CGCGAATACG GTGATGCTCG TGGGCTCGGC ATGCAATTAT CCGTACGGCA CGATCGATCC GATCGGCGCG CTGTCGGCGA TCGCCGTCGA AAAGGACGTG TGGCTGCACG TCGACGGCTG CCTCGGCGGC TGGATGCTGC CGTGGGGCGA AGCGCTGGGC TATCCGGACA TTCCGGCATT CGATTTTCGT CTGCCGGGCG TCACGTCGAT CTCGGCCGAT ACGCACAAGT TCGGCTACGG CCCGAAGGGC GGCTCGGTGC TCGCGTGGCG CGACGCGAGC TTTCGGCGCC ATCAGTATTT TCTGATGACC GATTGGGTGG GCGGCGTCTA TGGCTCGCCG GGATTGACGG GCAGCCGCTC GGGCGGCCTG ATCGCGGCGA CATGGGCGGC GCTGCGTGGC CTCGGGCGCG AAGGCTACCT CGCGCGGGCG AAGGCGATCT TCGAGACGGC CTTCGACATG CAGGCCGCGG TGCGTGCGAT TCCGGAGCTG CGCGTGCTCG GCAAGCCGAC GTTCTGCTTC GCGTTCGCCT CGGACGCGTT CGACATCTAT CACGTGAACG ATTTCATGCG GCAGCGCGGC TGGCGTCTCA ATGGCTTGCG GCGCCCCGAT GCGTTGCAGA TGTGCGTGAC GGGGCCGCAG ACGCAGCCGG GCGTCGCCGA GCAGTTCCGG CGCGATCTCG GCGCGGCGGC GGATTACGCG CGCGCTCACG CGCAGGAGCG CCCGAAGACG AGCGGCGTCT ACGCGAGCGA TGCGGCCGGC GTCGATCTGA GCGACGATGC GCGAACGAGG GCGTTCTTCA CGCAGGTGAT CGATCTGTTC ACGGATTGCC CGCTTTAA
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Protein sequence | MPTDVGTAKE NVMDLEEGIR RLYPYAEEFG VMRGFPEQGT PRDELLAQLR SMAEREDRNW ESGHSSGAMY SGDRDHHAWL NEAYSVFSHV NALRRDLCPS MNRMESEIVG MTVAMLHGDA VAAHHPGQRA CGMITLGGTE SILGATLAYR EKARAERGIG RPRMIWPASA HPVFRKAAHL FGFDVTVAPV DPVTMQVDAD FVRDAVDANT VMLVGSACNY PYGTIDPIGA LSAIAVEKDV WLHVDGCLGG WMLPWGEALG YPDIPAFDFR LPGVTSISAD THKFGYGPKG GSVLAWRDAS FRRHQYFLMT DWVGGVYGSP GLTGSRSGGL IAATWAALRG LGREGYLARA KAIFETAFDM QAAVRAIPEL RVLGKPTFCF AFASDAFDIY HVNDFMRQRG WRLNGLRRPD ALQMCVTGPQ TQPGVAEQFR RDLGAAADYA RAHAQERPKT SGVYASDAAG VDLSDDARTR AFFTQVIDLF TDCPL
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