Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2869 |
Symbol | |
ID | 4887699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 2725011 |
End bp | 2725703 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640132805 |
Product | transcriptional activator protein IrlR |
Protein accession | YP_001063861 |
Protein GI | 126444564 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.354021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTCC TTATCGTAGA AGACGAGCCG AAGACGGGCA TGTATTTGAA GCGCGGGCTC ACCGAAGCGG GCTTCGTCTG CGACTGGACA CAGGACGGCA TCAGCGGTCT GCATCAGTTG CAGACGGAGA ACTACGATCT CGCGATCCTC GACGTGATGC TGCCCGGTTG CGACGGCTGG ACAGTCGTGC GCGAGCTGCG CAGAACGCAC CGCACGCCGG TGCTGTTCCT CACCGCGCGC GATCACGTCG ACGATCGCGT GAAAGGCCTC GAGCTCGGCG GCGACGACTA TCTCGCGAAG CCGTTCGATT TCGCCGAATT GCTCGCGCGC GTGCGCTCGC TGCTGCGGCG CGGCCAGGCA ACCGATGCGC CGGTGCTGCG CGTCGCCAAT CTCGAGCTCG ATCTCATCCA GCGCAAGGCG CGCCGCCAGG GCAACACGAT CCTGCTCACC GCGAAGGAAT TCCTGCTGCT GTGGCTGCTG ATGCGCCGGC AAGGCGAGAT CCTGCCGCGC TCGCTGATCG CATCGCAGAT CTGGGACATC AACTTCGACA GCGATTCGAA CGTCGTCGAC GCGGCGATCA AGCGCGTGCG CGCGAAGGTC GATCAGGACT ACGAGCCCAA GCTGATCCAC ACGGTGCGTG GAATGGGATA CGTTCTCGAG CAGCGGGGCG AGCCGTGCGA ATCGTGTGCA TGA
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Protein sequence | MKVLIVEDEP KTGMYLKRGL TEAGFVCDWT QDGISGLHQL QTENYDLAIL DVMLPGCDGW TVVRELRRTH RTPVLFLTAR DHVDDRVKGL ELGGDDYLAK PFDFAELLAR VRSLLRRGQA TDAPVLRVAN LELDLIQRKA RRQGNTILLT AKEFLLLWLL MRRQGEILPR SLIASQIWDI NFDSDSNVVD AAIKRVRAKV DQDYEPKLIH TVRGMGYVLE QRGEPCESCA
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