| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2649 |
|---|
| Symbol | |
|---|
| ID | 4885703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2545740 |
|---|
| End bp | 2546519 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640132585 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001063641 |
|---|
| Protein GI | 126443328 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGCCGC GCCTGGCCGG CAAGCGCGCG TTCATCACCG GCGCTGCGGG CGGCCTCGGG
CGCGCGATCG CGCGCCGGAT GGCCGAGCAG GGCGCGCAGG TGTTCTTGAC CGACATCGTC
GACGCGGCCG TGCTCGAGGC GTTCGCGGCC GAGCTCAACG ATACGGCCGG CGAGCGCATT
GCGTGGGCGG CCGTGCAGGA CGTCGCCGAC GAAGCGCAGT GGGCGTCGCG CCTTTCGCAG
GCGGCAGACG CGATGGGCGG GCTGTCGGTG CTCGTGCACA ACGCGGGCGT CGGCTCGTTC
GGCGCGATCG GGCAGATCGC GCGCGACGAG TGGCGGCGCG TGATGGCGAT CAACGTCGAG
AGCATCGTGC TCGGCACGAA GCATGCGCTG CCGTATCTGG AGGCGGGCGC GCCCGCGTCG
ATCGTCAATA TCTCGTCGGT CGCCGCGTTC AAGCAGGAGC CCGACTACAC CGCGTACAAC
GCGTCGAAGG CGGCGGTCGC GTCGCTCACG AAGTCGATCG CGGTGGATTG CGCGCGCCGG
CAGACGGAGG TGCGCTGCAA CTCGATCCAT CCGTCGTTCA TCATGACGGG CATCGTCGCG
CCGATCGTCC GGCTGGTCGG CGAGAAGGAA GCCGCGCGCA AGCTCGCGCG CGGCGTGCCG
ATGCGCCGGC TCGGCGAGCC CGACGACGTC GCGCATGCGG CCGTCTATCT CGCGTCCGAC
GAGAGCCGCT ACGTGACGGG CGCGGAGCTC GTGATCGACG GCGGGATGTG CGCGGTCTGA
|
|---|
| Protein sequence | MAPRLAGKRA FITGAAGGLG RAIARRMAEQ GAQVFLTDIV DAAVLEAFAA ELNDTAGERI
AWAAVQDVAD EAQWASRLSQ AADAMGGLSV LVHNAGVGSF GAIGQIARDE WRRVMAINVE
SIVLGTKHAL PYLEAGAPAS IVNISSVAAF KQEPDYTAYN ASKAAVASLT KSIAVDCARR
QTEVRCNSIH PSFIMTGIVA PIVRLVGEKE AARKLARGVP MRRLGEPDDV AHAAVYLASD
ESRYVTGAEL VIDGGMCAV
|
|---|
| |