Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A2507 |
Symbol | |
ID | 4885982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 2421456 |
End bp | 2423693 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640132444 |
Product | TonB-dependent copper receptor |
Protein accession | YP_001063501 |
Protein GI | 126443902 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATCCA CATTCCTGCG TCACGCGCCC GCCGCGCGTG GAGACCACGC GCGCCGCCGG CGGCGCGCGA TCACGCTTAC CGTTCCCGCG CTCGCCGCGG GCGCCTTTCA CCTCGCGCCG GCCGTCGCGC AGACGAGCGA GGCCGTGCAC GGCCACGGCA CGCTCGGCGC GTCCGGCGTA GCGAGCCGCG CCGAGACCGA CGCGACGAGC GCCAAATCGG ACGGCGCGGT TCGCGAAGCG GCGAGCCGCA CGACAACCGG CGCCGCGCCG GACGCCACGA TGCTGCCGAC GATCGAAATC GTCGCGGCGC CCGAATCGAC GCCGCTCGTC GTCGTCACCG ATCCGAAGAC GCCGCGCCAG CCGCTGCCCG CGAGCGACGG CGCCGATTAT CTGAAGACGA TTCCCGGCTT CGCGTCGATC CGCAGCGGCG GCACGAACGG CGACCCGGTG CTGCGCGGGA TGTTCGGCTC GCGGCTGAAC ATTCTCGCGA ACGGCATGCC GACGCTCGGT GCGTGTCCCG GCCGGATGGA CGCGCCGACG TCGTACATCG CGCCCGAGAG CTACGACAAG GTGACGCTCG TCAAGGGGCC GCAGACCGTG CTGTACGGGC CGGGCGCATC GGCGGGCACG GTGCTGTTCG AGCGCGTGAC GCCGCGCTTC AAGACGCCGG GCATGCGCTT TGACGGCAGC GTCGTCGGCG GCTCGTTCGG GCGCAACGAT CAGAACGTCG ACGTGACGGC CGGCACGCCC GACTTCTACG GGCGCGTGAG CGCGAACCAT GCGCACTCGC AGGACTACGA GGACGGCAAC GGCCGCACGG TGCCGTCGCA ATGGGACAAG TGGAACGCGG ATGCGGCGCT CGGCTGGACG CCCGACGACA ACACGCGGCT CGAGCTGACG GCAGGCACGG GCGACGGCTA CGCGCGCTAT GCGGGCCGCG GAATGGACGG CGCGCATTTC CGGCGCGAGA CGTTCGGTCT GAAGTTCGAC AAGAAGCACA TCGGCGACGT GCTCGATCGC ATCGAGGCGC AGGTCTTCTA CAACGAAGCC GATCACGTGA TGGACAACTA CACGCTGCGG ATGCCCGATC CGACGAGCAG CATGCCGATG CGCATGGCCT CCGAAGTGCG CCGCCGCACG CTCGGCGCGC GCGTCGCGGC GACGCTGCGC TTGACCGACG CGTTCAAGCT CGTGACGGGC GTCGATGCGC AGTCGAACCG CCTCGACTCG CGCTCGGCGA TGGGGATGCA GAACTACGGC GACAAGCCGT GGAATCCGCA GGCGAACATG TGGAACGCGG GCGCGTTCGG CGAGCTGACC TGGTATGCGA GCGATGCGTC GCGCGTGATC GGCGGCGCGC GGATCGACTA TGCGGCCGCG CGCGACAAGC GCGCGACGAC GGGCGGCATG AAGATGAGCA TGCGCAATCC GACGTTCGAC GATCTCCGCT CGCGCGTGCT GCCGAGCGGC TTCGTGCGCT ACGAGCGTGA TCTCGCGTCG CTGCCCGTCA CGTGGTACGC GGGCATCGGC CATGCGCAGC GCTTTCCTGA TTACTGGGAG CTGTTCTCCG CCAAGCGCGG CCCGAACGGT TCGATCAACG CGTTCTCCGC GATCAAGCCC GAGAAGACGA CGCAGCTCGA CATCGGCGCG CAGTACAAGA GCGACAAGCT CGACGCCTGG GTGTCCGCCT ATGCGGGCTA CGTGCAGGAC TTCATCCTGT TCGACTATGC GACGGGCCCG ATGGGACAGA TCACGCGGGC GACGAACGTC AACGCGCAGA TCATGGGCGG TGAGGTGGGC GCGTCGTGGC GTCCGCTCGC GCCGTGGCGC TTCGAAGGGT CGCTCGCGTA TGCGTGGGGG CGCAACGTGC AAAGCGGTGC GCCGCTGCCG CAGATGCCGC CGCTCGAGGC ACGCTTCGGC GTCGAGTACA CTCGCGGGCC GTGGTCGGCG GGCGGGCTGT GGCGGGTCGT TGCGCCGCAG CATCGCTACG CGCTGAACGA GGGCAACGTC GTCGGCAAGG ACTTTGGTCC GAGCGCCGGT TTCGGCGTGC TGTCGCTGCA CGCGCAGTAC CACGTGAGCA AGACGGTGCA GATCTCGGTC GGCGTCGACA ACGTGCTCGA CAAGGCTTAT GCGGAGCACC TGAACCTCGC GGGCAACGCC GGTTTCGGCT ATCCGGCGAA TCTGCCTGTC ACCGAACCCG GCCGCACCGC GTGGGTTCGT TTGAGCACCA AGCTCTGA
|
Protein sequence | MTSTFLRHAP AARGDHARRR RRAITLTVPA LAAGAFHLAP AVAQTSEAVH GHGTLGASGV ASRAETDATS AKSDGAVREA ASRTTTGAAP DATMLPTIEI VAAPESTPLV VVTDPKTPRQ PLPASDGADY LKTIPGFASI RSGGTNGDPV LRGMFGSRLN ILANGMPTLG ACPGRMDAPT SYIAPESYDK VTLVKGPQTV LYGPGASAGT VLFERVTPRF KTPGMRFDGS VVGGSFGRND QNVDVTAGTP DFYGRVSANH AHSQDYEDGN GRTVPSQWDK WNADAALGWT PDDNTRLELT AGTGDGYARY AGRGMDGAHF RRETFGLKFD KKHIGDVLDR IEAQVFYNEA DHVMDNYTLR MPDPTSSMPM RMASEVRRRT LGARVAATLR LTDAFKLVTG VDAQSNRLDS RSAMGMQNYG DKPWNPQANM WNAGAFGELT WYASDASRVI GGARIDYAAA RDKRATTGGM KMSMRNPTFD DLRSRVLPSG FVRYERDLAS LPVTWYAGIG HAQRFPDYWE LFSAKRGPNG SINAFSAIKP EKTTQLDIGA QYKSDKLDAW VSAYAGYVQD FILFDYATGP MGQITRATNV NAQIMGGEVG ASWRPLAPWR FEGSLAYAWG RNVQSGAPLP QMPPLEARFG VEYTRGPWSA GGLWRVVAPQ HRYALNEGNV VGKDFGPSAG FGVLSLHAQY HVSKTVQISV GVDNVLDKAY AEHLNLAGNA GFGYPANLPV TEPGRTAWVR LSTKL
|
| |