| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A2231 |
|---|
| Symbol | |
|---|
| ID | 4888532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 2163852 |
|---|
| End bp | 2165372 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640132168 |
|---|
| Product | endo-1,4-D-glucanase |
|---|
| Protein accession | YP_001063225 |
|---|
| Protein GI | 126443038 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.161113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGC AAGCGGGGCG AGACGAAGGC GTCGGGCGCA TCGGGCGTGA AGCGGGCGAC
GCGCGCGAGG CGGCCGGGGC GGGCGAGGCG TGCGGGAGGC GCCACGCGCG GGCCGACGCG
TGGGCGCGGC GGGCGTCGCG AGCATCGCGC GGGTGGCGCA CGTTTTGGCG CGGGCGCGGG
GGCGTGCGCG CCGTCGTGGC GAGCGTCGTG GCGAGCTTCT CGGTGATGGC GTTCGCGGCG
GCGACGTTGC CGGTGTCGTG GCGCGTCGCC GCGGCGGCGG AGCGTACGCG AAGCGGCGGC
GAACGCGCGG GCGGGCTGCG CGACACGGCG GGCTTGATCG AGATCTCGGC GGCGGCGCCG
GCCTCGACGC CGATCCCGGC GGCGCCGCGG CGGTTCGCGC AGCCGTTCGC GCAGCCCGCC
CGCGCGTTCG CCGCCGCGAG CGCCTGCGCG CCGTCCTGGC CGCGCTGGGA CCGTTTCAAG
CGTGACTTCG TATCGGCCGA CGGCCGCGTG ATCGACGTCG GCTCGGCCGA CGAGCGGACC
GTATCCGAGG GGCAGGCGTA CGGCCTTTTC TTCGCGCTCG TCGCGAACGA CCGCGCGGCG
TTCGACGCGC TGCTGCGCTG GACCGAGGAC AATCTCGCGC AGGGCGATCT GAGCGCGCGT
CTGCCCGCGT GGCTGTGGGG CCGCGCGGCC GACGGCGCGT GGCGCGTGCT CGATGCGAAC
GCCGCGTCCG ACGCCGATCT GTGGCTTGCG TACGCGCTGC TCGAAGCGGG GCGCTTGTGG
CGCGAGCGCA GCTACACGGC GCGCGGCGCG TTGCTCGCGA AGCGCGTGCT CGACGAGGAG
ACCGCGACGC TGCCGGGGCT CGGTCTCGTG CTGCTGCCGG GCCCGACGGG TTTTCGGCCG
GCGCGCGACG CGTGGCGGCT GAATCCGAGC TATTCGCCGC CGCAGGCGAT TCGCGGAATC
GGCGCGCATG TGCCCGACGA CGCGCGCTGG GCGCGGCTCG CGGCGGGCGT CGGCCGCGTG
CTGACCGACA GCGCGCCGCG CGGCTTCGCG CCGGACTGGG CGCTGTATCG CGCGGGCCGC
GGCTTCGAGC CGGACGCCGA AACGCATGCG GCGAGCGCGT ACAACGCGAT TCGCGTCTAT
CTGTGGGCGG GCATGCTCGA TGCGGGCGAT CCGCTGGCGC GGCCGCTCGT CGCGCATTTC
GCGCCGTTCG CCGAGCATGT CGCCGCGCAT GGCGCGCCGC CGGAGGCGGT CGATGCGACG
ACGGGCACGG CCGCCCCGCG CGACGGCAAT GCCGGGTTTT CCGCGGCGGC CGTGCCGTTT
CTCGAGGCGC GCGGCGAGCG GGCGAGCGCC GACGCGCAGC TCGCGCGCGT CGCGCGGCTC
GAGCGCGAGA CGGCGAGCGG CTATTACGCG AACGTGCTGA CGCTGTTCGG GCTCGGCTGG
CGCGACGGGC GCTACCGGTT CGCGGCCGAC GGCACGCTGC GGGTGCGATG GAGCGAGCCG
TGCTCGACGC CCGCGCGTTG A
|
|---|
| Protein sequence | MARQAGRDEG VGRIGREAGD AREAAGAGEA CGRRHARADA WARRASRASR GWRTFWRGRG
GVRAVVASVV ASFSVMAFAA ATLPVSWRVA AAAERTRSGG ERAGGLRDTA GLIEISAAAP
ASTPIPAAPR RFAQPFAQPA RAFAAASACA PSWPRWDRFK RDFVSADGRV IDVGSADERT
VSEGQAYGLF FALVANDRAA FDALLRWTED NLAQGDLSAR LPAWLWGRAA DGAWRVLDAN
AASDADLWLA YALLEAGRLW RERSYTARGA LLAKRVLDEE TATLPGLGLV LLPGPTGFRP
ARDAWRLNPS YSPPQAIRGI GAHVPDDARW ARLAAGVGRV LTDSAPRGFA PDWALYRAGR
GFEPDAETHA ASAYNAIRVY LWAGMLDAGD PLARPLVAHF APFAEHVAAH GAPPEAVDAT
TGTAAPRDGN AGFSAAAVPF LEARGERASA DAQLARVARL ERETASGYYA NVLTLFGLGW
RDGRYRFAAD GTLRVRWSEP CSTPAR
|
|---|
| |