Gene BURPS668_A2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A2011 
Symbol 
ID4887985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1944447 
End bp1945061 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content71% 
IMG OID640131949 
ProductHAD-superfamily hydrolase 
Protein accessionYP_001063006 
Protein GI126443315 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC CGATCAAGCT GGTGCTGTTC GACATGGAGG GCGTGCTGTC GGATTACGAC 
CGCGCCGCGC GCACCGCGCG CCTGGCCGAC CTGACGGGGC GGCCGCCCGA GGCGGTGCGT
CACGCGATCT GGGAGTCGGG GCTCGAAGCG CGCGCCGACG CGGGGCGCAT CGGCGTCGAC
CAATACCTGC GCGAGCTGGC GCAATTGCTC GGCGCGCCGG TGAGCCGCGA CGATTGGCTG
ATCGCGCGCA AGGCGTCGAT CACGCCGAAT CTGGAGGTCG TCGCGCTGGC GGAGCGCGTC
GCGCGGTGCA GCCGGATCGC GGTGCTGACG AACAATTGCC GGCTCGTTAC CGATTACATC
GATTATCTGA ATCCGCCCGT TGCGCGCGTG TTCGGTGCGC ACGTCTATCC GTCCGCGACG
TTCGGCGCGG CGAAGCCGGA CGCGCGGGCT TACCTCGGCT GCGTCGGCTG GCTCGGCGTG
ACGGCACAGG AGACGCTTTT CATCGACGAC GCCGATGCGA ACGTCGCGGG CGCGGTGAGC
GCGGGGCTGC TCGGATGCAA GTTCGTGGGC GCGGGCGCCC TGGCGCAAGA GCTGGCGCGG
CGGCGGCTCG CATAG
 
Protein sequence
MTQPIKLVLF DMEGVLSDYD RAARTARLAD LTGRPPEAVR HAIWESGLEA RADAGRIGVD 
QYLRELAQLL GAPVSRDDWL IARKASITPN LEVVALAERV ARCSRIAVLT NNCRLVTDYI
DYLNPPVARV FGAHVYPSAT FGAAKPDARA YLGCVGWLGV TAQETLFIDD ADANVAGAVS
AGLLGCKFVG AGALAQELAR RRLA