Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1914 |
Symbol | |
ID | 4885806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1858944 |
End bp | 1860197 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640131852 |
Product | multidrug resistance efflux pump |
Protein accession | YP_001062909 |
Protein GI | 126443286 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGACA CCGCCACCGA CACTGCGCGC GCGAAGGCGC CCACCGATCC GGCCGTTTCC GACGGCGCGC CCGCGAGCGG GCACGGCTTG CCTGCGTCGC CCGAAACCGC CGCGACGCTT GCCGCGCGCC GGGCCACGCG CTGCCGCCGC TTCGCATGGT TCTTCGGAGT GCTGGCGATC GTCGCGCTGG GCGCGGCGCT CTACTGGTTC ATCGTGGGCC GCTTCAGCGA AGAGACGGAC GATGCGTACG TGGCGGGCAA CGTCGTGCAG ATCGCCGCGC AGATCCAGGG GACGGTGACC GACGTGCTGG TGGCCGACAC GCAGCAGGTG AAGGCGGGGC AGGCGCTGGT GCGGCTCGAC GACGCGGAGG CGGCGGCGGC GTTCGCGCAG GCGCAGGCGC AGCTCGCGCA GGCGGTGCGG CAGGTGGCGA ACACGCGGCT GTCGATGCAG ACGTACGAGC AGACGGTGAA GGCGCGCGAG GCGGACCTGA AGCTCGCGCA GCAGGCGTAT CGGGCGCGGG CGGGGGCGTC GGTGGAGGTG GTGGCGCCGG AGGAGCTGGC GCGGGCGAAG TCGTCGCTGG CGAACGCGCA GGCGGCGCTG GCGGGAGCGC AGGCGCAACG GGAGGCGGCG CGCGCGCTGG GCAGCGAGCG GCCGGTCGGG CAGAACCCGG CGGTGCAGCA GGCGGCCGCG CAGTTCAAGC TGGCGTACCG GAACCTGAAG CGCACGACGA TCGTGTCGCC GGTGGACGGG ACGGTCGGGC AGCGGTCGGT GCAGATCGGG CAGCAGGTGG GGCCGGGGGT GCCGCTGATG TCGGTGGTGC AGTTGCGGCA GGTGTGGGTG GAGGCGAACT TCAAGGAAGG GCAGTTGCGG CACATGCGGG TGGGCCAGCC GGTGCGGCTC GAATCGGACC TGTACGGCGC GCGGGTGACG TATCACGGCC GGGTGGAGGG TTTCTCGGCG GGCACGGGCA GCGCGTTCTC GATGCTGCCG TCGCAGAACG CGGCGGGGAA CTGGATCAAG GTGGTGCAGC GCCTGCCGGT GGTGATCTCG CTGGAGCCGT CGGAGCTGGC GGCGCACCCG TTGCGGGTGG GGCTGTCGAT GCGCGCGACG GTGCAGACGA AGGCGCGCGG CGGGCATCTG CTGGACGGCG ACGCGCCGCT GCCGGCGCAG CGCACGCGGG TGCACGAAAT GCACGCGGGC GAGGCGGAGG CGGCGGCCGA GGCGGTGATC CGCGCGAACG ACGGTGGGCA GTGA
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Protein sequence | MNDTATDTAR AKAPTDPAVS DGAPASGHGL PASPETAATL AARRATRCRR FAWFFGVLAI VALGAALYWF IVGRFSEETD DAYVAGNVVQ IAAQIQGTVT DVLVADTQQV KAGQALVRLD DAEAAAAFAQ AQAQLAQAVR QVANTRLSMQ TYEQTVKARE ADLKLAQQAY RARAGASVEV VAPEELARAK SSLANAQAAL AGAQAQREAA RALGSERPVG QNPAVQQAAA QFKLAYRNLK RTTIVSPVDG TVGQRSVQIG QQVGPGVPLM SVVQLRQVWV EANFKEGQLR HMRVGQPVRL ESDLYGARVT YHGRVEGFSA GTGSAFSMLP SQNAAGNWIK VVQRLPVVIS LEPSELAAHP LRVGLSMRAT VQTKARGGHL LDGDAPLPAQ RTRVHEMHAG EAEAAAEAVI RANDGGQ
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