| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1659 |
|---|
| Symbol | |
|---|
| ID | 4886894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1601242 |
|---|
| End bp | 1602759 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640131598 |
|---|
| Product | linear gramicidin synthetase subunit C |
|---|
| Protein accession | YP_001062655 |
|---|
| Protein GI | 126442769 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0625323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAA CCAGCGTCAA TCGTCTGTTC ACTTCGCAAG CCCGCCTTGC GCCCGAAGCG
CTCGCGCTCT CGAGCGGCGA CACGCGCCTC ACGTACGGCG AGCTCGAACG ATGCGCGAAC
CACCTGGCCC GACGCCTCGT CGACAGCGGC GTGCGGCCGC GCGACCGGGT CCTGCTCTGC
CTGCCGCGCT CGGTCGACGC GGTGATCGCG ATGCTCGCGA TCATGAAGAC CGGCGCGGCG
TTCGTGCCGG TCGATCCCGC GTATTCCGAC GCGATCAAGC GCGGCTATGC GAGCGACAGC
GGCGCGCGGC ACGCGCTCGC GCGCGCGGCC GACGCCGCGG CGTTTCGCGG CGGCGCGCTG
GGCGTGATCG ACGCCGACGA TCTGTCGGCC GCACGCGATG ACGAGGGGCC CGAAGTCGAT
GCGGGGCACG ACGGGGAAAC GCCGGTGTAC GTGATGTTCA CCTCCGGCAG CACCGGCCGG
CCCAAGGGCG TGATCGTCGC GCACCGCGGC GTCGCGCGGC TCGTCAGGGA AACGAACTAT
ATCCGGATCA CGCGCGAGGA CACGCTGCTG CTGCTCTCGC CGATCACGTT CGACGCATCG
ACGTTCGAGA TCTGGGGGGC GCTGCTCAAC GGCGCGCGGC TTGCGATCTA CGAGGACGCC
ACGTTCGATC CGAACGCCGT CAGCCGGCTC ATCGCGCGCG AGCAAGTAAG CGTGATGTGG
CTCACCGCGG GGCTGTTCCA TCTGGTCGCG CGGCGCTTCA TCGGCATGCT GGCGGGGCTG
CGCGTCGTGC TCGCGGGCGG CGACGTGCTG AGCGCCGCCG CGATCGGCGC GGTGTTCGAC
GCGTTCCCGT CGATCACCGT CATCAACGGC TACGGCCCGA CCGAGAACAC GACGTTCACG
TGCTGCCACG TGATGACGGC CGACCGGCGG CCGACCGGTA CGGTGCCGAT CGGCCGGCCG
ATCGCGGGCA CCGACGTTCG CATTCTCGAC GCCGCGCTGC GCGAGGTGCC TGACGGCGAG
GAAGGCGAGC TGTGCGCAAG CGGCCTCGGC GTCGCGCTCG GCTACCTGAA CGCGCCCGAC
GCGACGCGCG CCGCGTTCGT CGACTGCCCG GCGACGGGCA GCCGGCTCTA TCGCACCGGC
GACCGCGCAC GGCGCCGGGC GGACGGCGTG ATCGAGTTCC TCGGCCGCAG CGACCGGCTC
GTGAAGATAC GCGGCTACCG CGTGTCGCTC GACGAGCTGC AATCCGTCCT CGCCGGCATT
CCCGGCGTCG AGGAGGCGCT CGTCAAGGTA TCCGAAGAAG CGACCGGCGA GAAGCGCCTC
AGCGCGATCG TCCAATCCGG CCGCGCCGAA CCGGACATGA AGGCCTACGT GCGCCGCGAA
CTGGCCAAGC GCGTGCCGCC GTTCCAGATT CCCGACGACA TCCGGATTTT CCCGCACATC
CCGCTCAACG CGAACGGCAA GCTCGACCGC CACCGGCTGC CGGCCAGCGA GACCTCGACC
CTCGGAGAGA AGCCATGA
|
|---|
| Protein sequence | MTSTSVNRLF TSQARLAPEA LALSSGDTRL TYGELERCAN HLARRLVDSG VRPRDRVLLC
LPRSVDAVIA MLAIMKTGAA FVPVDPAYSD AIKRGYASDS GARHALARAA DAAAFRGGAL
GVIDADDLSA ARDDEGPEVD AGHDGETPVY VMFTSGSTGR PKGVIVAHRG VARLVRETNY
IRITREDTLL LLSPITFDAS TFEIWGALLN GARLAIYEDA TFDPNAVSRL IAREQVSVMW
LTAGLFHLVA RRFIGMLAGL RVVLAGGDVL SAAAIGAVFD AFPSITVING YGPTENTTFT
CCHVMTADRR PTGTVPIGRP IAGTDVRILD AALREVPDGE EGELCASGLG VALGYLNAPD
ATRAAFVDCP ATGSRLYRTG DRARRRADGV IEFLGRSDRL VKIRGYRVSL DELQSVLAGI
PGVEEALVKV SEEATGEKRL SAIVQSGRAE PDMKAYVRRE LAKRVPPFQI PDDIRIFPHI
PLNANGKLDR HRLPASETST LGEKP
|
|---|
| |