Gene BURPS668_A1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1506 
Symbol 
ID4886876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand
Start bp1445970 
End bp1446479 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID640131445 
Productsigma-70 family RNA polymerase sigma factor 
Protein accessionYP_001062502 
Protein GI126443493 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0804229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGCCA ACACTTTGCG TCTGCAGCGG GAGATCGCTG CGCTCTATAC CGGTCATCGC 
GGCTGGCTGC ACGGCTGGCT GTCGAAGAAG CTCGGCTGCG GCGAGCGCGC GGCCGATCTG
GTTCACGACA CGTTCATCCG CCTGCTCGCA CGCGACGAGC CGATCGACGC GGCCGAGCCG
CGCGCGTTCC TGACGACCGT CGCGCAGCGC GTGCTGTACA ACCACTGGCG GCGCGAGCGG
CTCGAACGCG CGTATCTCGA CGCGCTCGCG CAATGGCCGG AGGCGGTCGC GCCGTCGCCG
GAGACACGCG CCGTCCTGTT CGAGACGCTC GTCGAGGTCG ACCGGATGCT CGACGGGCTG
CCCGCCGTCG TTCGCCGCGC GTTCCTGCTC GCGCAGCTCG ACGGCATGAC GCACGCGCAG
ATCGCGGCCG AGCTGCGCGT GTCGCTCGCG ACCGTCAAGC GCTACCTGGT GAAAGCGGGC
GCGCAGTGCT ACTTCGCGAT CGCCGCATGA
 
Protein sequence
MPANTLRLQR EIAALYTGHR GWLHGWLSKK LGCGERAADL VHDTFIRLLA RDEPIDAAEP 
RAFLTTVAQR VLYNHWRRER LERAYLDALA QWPEAVAPSP ETRAVLFETL VEVDRMLDGL
PAVVRRAFLL AQLDGMTHAQ IAAELRVSLA TVKRYLVKAG AQCYFAIAA