Gene BURPS668_A1486 details

Gene Information

• Locus tag: BURPS668_A1486
• ID: 4888426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: -
• Start bp: 1430410
• End bp: 1432281
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640131425
• Product: chloride channel (ClC) family protein
• Protein accession: YP_001062482
• Protein GI: 126443873
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0038] Chloride channel protein EriC

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.877185
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCG CCGCCCCACA CAAACGCGAT TTCGCGTCGA ACGCGCGACT GCCGCGCATC 
GCGCTCCTCG CGCTCGCGAT CGGCGTGCTC AGCACGTTCG CCGCGTTCGC GCTGCTGAGC 
CTCATCCATC TGTTCACGAA CCTGTTCTTC TTCCAGCGGT TCTCGTTCGC CGAGCACTCG 
CCCGCGCTGA ACACGCTCGG GCCGTGGGCG GCCGCGGTGC CCGTCGCGGG CGGCATCGTC 
GTCGGGCTGA TCGCGCGCTT CGGCTCCGAG AAGATCCGCG GCCACGGCAT TCCCGAGGCG 
ATCGAGGCGA TCCTGTTCGG CAAGAGCCGG ATGTCGCCGA AGGTCGCCGT ATTGAAGCCG 
CTCGCGTCGG GCATCGTGAT CGGCAGCGGC GGGCCGTTCG GCGCCGAAGG GCCGATCATC 
ATGACGGGCG GCGCGATCGG CTCGCTGATC GCGCAGTTCG TGAAGGTGAC GGCGGCCGAG 
CGCAAGACGC TGCTCGTCGC GGGCGCGACG GCCGGGATGA CCGCGGTGTT CGGCACGCCG 
GTGGCCGCCG TGCTGCTCGC CGTCGAACTG CTGCTGTTCG AATGGCGGCC GCGCAGCTTC 
CTGCCGGTCG CGCTCGCGTG CGCGGTCGCG GGCTTCGCGC GCGCCGCGTT CTTCGGCGTC 
GGCCCGCTGT TTCCGGTCGA GACCGCGGCT CCGACGGCCG CCGCGCTCGG CTCGTGCGCG 
CTGGCGGGGC TCCTGTCGGG CGCGCTCGCG TGCGGGCTGT CGGTCTCGCT CTACAAGATC 
GAGGACCGGT TCGGCAAGCT GCCGGTTCAC TGGATGTGGT GGCCCGCGAT CGGCGGCCTC 
GCGGTCGGGA TCGGCGGGCT CATCGAGCCG CGCGCGCTCG GCGTCGGCTA CGACGTGATC 
GGCGATCTGC TGCACGGCCA TATCGCGCTG CAGATCGCGC TCGCGATTCT CGTCGTCAAG 
GCGGTGATCT GGGTGATCGC GCTCGGCTCG GGCACCTCGG GCGGCGTGCT CGCGCCGCTG 
CTGATGCTGG GCGCGGGGCT CGGCACGCTG CTCGGGCCCG TGCTGCCGGG CGGCGAGCCC 
GCGCTGTGGC CGCTCGTGTG CATGGCCGCG ACGCTCGGCG CCACGCTCGG CGCGCCGCTC 
ACCGCGATCG TGTTCGCATT CGGCCTCACG CACGACGCGA ACGCGCTGCT GCCGCTGCTC 
ACCGCGACGC TCGTCGCGCA CGGCTTCGCG ACTGTCGCGA TGAAGCGCTC GATCATGACC 
GAGAAAATCG CGCGGCGCGG CTATCACATC TATCGCGAAT ACGGCGTCGA TCCGCTCGAG 
CGCCATTACG TCGACGAAGT AATGACGCGC AGCGCGGTGA CGATCGACGC GGACCTGAGC 
GTCGAGGTCG TGCGCGCGCG CTACTTCGGC GCGACGCAGG CGCACCGCGC GTATCCGGTC 
GTGCGCGACG GCGTGCTGAT CGGCATGCTC GATCGCGCGA CGCTCGACGG GAGCCCCGCC 
GCGCACGACG GCGACGGGCA GGCCGACGAC GCGCGAGCGG CGAAGATGCG GGCGGCCGAC 
GTGCAGATGA TCGACATGCG GGTGGCCGAC GTGCGGGTGG CCGACGTGCT GCCGCGCCGC 
GCCCCGCTCT TCTCGCTCGC CGACGAAACG TGCCGCCTCG TCGCGACGCG GCTCGCCGTG 
CACCAGCTCG AACGCCTGCC GGTCGTCGCC GATCCGGACA CGATGCGCGT CGTCGGCATC 
GTGTCGCGCA GCGATCTCGT GAAGCCGGCG CTGCGCCACT TCGACGACGA GCACAAACGC 
GAACGCTTCC GTCGCGCGCA TCCCGCCGCG TTCGTCAAGC GCCGCTTCGC ACCGGCGCGC 
AAGACGGGCT GA 

 

Protein sequence

MSIAAPHKRD FASNARLPRI ALLALAIGVL STFAAFALLS LIHLFTNLFF FQRFSFAEHS 
PALNTLGPWA AAVPVAGGIV VGLIARFGSE KIRGHGIPEA IEAILFGKSR MSPKVAVLKP 
LASGIVIGSG GPFGAEGPII MTGGAIGSLI AQFVKVTAAE RKTLLVAGAT AGMTAVFGTP 
VAAVLLAVEL LLFEWRPRSF LPVALACAVA GFARAAFFGV GPLFPVETAA PTAAALGSCA 
LAGLLSGALA CGLSVSLYKI EDRFGKLPVH WMWWPAIGGL AVGIGGLIEP RALGVGYDVI 
GDLLHGHIAL QIALAILVVK AVIWVIALGS GTSGGVLAPL LMLGAGLGTL LGPVLPGGEP 
ALWPLVCMAA TLGATLGAPL TAIVFAFGLT HDANALLPLL TATLVAHGFA TVAMKRSIMT 
EKIARRGYHI YREYGVDPLE RHYVDEVMTR SAVTIDADLS VEVVRARYFG ATQAHRAYPV 
VRDGVLIGML DRATLDGSPA AHDGDGQADD ARAAKMRAAD VQMIDMRVAD VRVADVLPRR 
APLFSLADET CRLVATRLAV HQLERLPVVA DPDTMRVVGI VSRSDLVKPA LRHFDDEHKR 
ERFRRAHPAA FVKRRFAPAR KTG