Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1303 |
Symbol | |
ID | 4886387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1229442 |
End bp | 1230530 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640131242 |
Product | outer membrane porin |
Protein accession | YP_001062300 |
Protein GI | 126443774 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGC ATGCGGCAGC AACATTACTC GGCGCGCTCG CCGCCGCCGG CGCGTGGGCG CAGAGCAGCG TCACGCTGTA CGGCAGCCTC GACGCCGGCG TCGCGTACGT GAACAACGTC GGCGGCGGCG CAAAGTGGTC GATGATTCAG GGCAACACGC AGCCCGATCG ATGGGGGCTG AAGGGCGTCG AGGATCTGGG CGGCGGTCTG AAGGCGATCT TCCAGCTCGA AAACGGCTTC TATACGAACA ACGGCCAGAT GGCGGCGGCG GGCACGATGT GGAACCGTCA GGCGTTCGTC GGCCTGAATT CCGACCGGCT CGGCGCGCTG ACGCTCGGCC ATCAGACGCC GTTCAACTTC GACTGGCTCG ACCCGCTGTC GAGCGCATTC CTCGCGCAGA GCTGGTATGC GTTCCATCCC GGCAACCTCG ACCAGCTCGC GGACACCAGC ACCGTGCCGT TCAACAACTC GGTCAAGTAC CGGTCACCCG TCTTTGCGGG CTTCACGGTG GGCGCGATGC TCGGCTTCGG CAACACGACG AACTTCTCGA CCGGCCGCAC GATGAGCTTC GGCGTGAACT ACGCGAACGG CCCGTTCAAG GCGGCCGCCG TCTATTCGAA CGAGCACGAC CAGGCGTTCC CGATGGCGAC CGTCGGCGGC ATCGCCGGGC CGGGCGGCAC GTTCCAGGGC ATGCCCGTCG CGAGCTATGT CGCGAAGAAG GCGCAGAACA TGGGCGCGGG CCTGTCGTAC CGCTTCGGCC CGCTGCTCGT GCACGGCCTT TACACGCGCG TGAAACTGCA GGCGAACGGC CACTCGGATA CGTTCCAGAG CTACGACGCC GGCGCGAACT ACCAGAGCTC GCCGTTCAAC GTGATCGCGG GCGGCGCGGC GACTTCGACG CTCGCCGGCC GCCGCTGGAG CCAGTTCGAG CTCGGCGACA CGTATTCGCT GTCCAAGCGC ACGCAGCTCT ACGTGAACGT GCTGTACGAG CACGCGAGCG GCAACGCGAA GGCCGCGTTC TTCACGGCGG GCGCGTCGAG CACGGCGAAT CAGGTGATTG TCCTGACGGG GATTCACCAC TCGTTCTGA
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Protein sequence | MVKHAAATLL GALAAAGAWA QSSVTLYGSL DAGVAYVNNV GGGAKWSMIQ GNTQPDRWGL KGVEDLGGGL KAIFQLENGF YTNNGQMAAA GTMWNRQAFV GLNSDRLGAL TLGHQTPFNF DWLDPLSSAF LAQSWYAFHP GNLDQLADTS TVPFNNSVKY RSPVFAGFTV GAMLGFGNTT NFSTGRTMSF GVNYANGPFK AAAVYSNEHD QAFPMATVGG IAGPGGTFQG MPVASYVAKK AQNMGAGLSY RFGPLLVHGL YTRVKLQANG HSDTFQSYDA GANYQSSPFN VIAGGAATST LAGRRWSQFE LGDTYSLSKR TQLYVNVLYE HASGNAKAAF FTAGASSTAN QVIVLTGIHH SF
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