| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1216 |
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| Symbol | colA |
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| ID | 4885883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009075 |
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| Strand | + |
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| Start bp | 1158037 |
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| End bp | 1159974 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640131155 |
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| Product | collagenase |
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| Protein accession | YP_001062213 |
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| Protein GI | 126444490 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000787421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGG TGTTCCGAAA AACCCGCCGC TGGTCCGCCG TGGCGGCGCT ATCGGCATTC
GTGGGGCTGG CCGGCGCCGC GTCGGCCAAT ACGCAGCCGA TGCAACCGAC GCAACAAAAG
CAGGCGCGCA TGCCGCGCCT GCCGCAGAAC CTGCCGGTTT CGCCCGAGCA GGCCGAATAC
AATCTGCCGC TCAGCGAGCA GGATCGTGCG GCGCTCACCA GGCCTTCGCC GCTCAAGCAG
CCGGCCAAGC GCGGCAAACG CAGCGCGCCG GGCGCCGATT GCCGCGACAT GTCGGTGATG
ACTCAGTATC GCGGCGCCGC GCTCGCCGAT TACATCGCGA ATCTTCCCGA TTATGAATGC
CATTACGGCC TGTTCTCGGT CGATAAAACC CTGGCCGCGC AGATTTTCAG TGCGGAAAAT
GTGCATGCCG TCGCGAGCCG TTTCGTGCAG GATATCTATC GCTATGATGC GAGCAACTTG
ATTCTGGTCA ATTTGCTGAT TTATCTGCGT TCCGCTTATT ACCAATATGA TGTATCGGGC
ATTGCCAATC CGATTCCGAA TCTCGCGGTA TGGCTGCGCC CGTATATCAA GCAGAGCCTG
GAGGGCGCCG CGCTCTATCG AGAGAACGCG CGCGCGCCGA GCACCGCGAA CGAGCTGATG
AAGTTCATCA CGAACATGAA GGACGAGGCG TTCTATCTGC CCACGCTGAA GGCGCGCATT
GCGTTCTACA CGGCGAGCGC GACGAATCCG CAGGCGGCGG CGCCGCTGTT GCAGCCGAGC
GCGGCGGGCG GCTTCACCGG CCTGCTCACG GTGTTCTTCT ATGCGCATCA GCGCAGCGGC
GCGCAGCCGA TGCTCGATAG CGACGCGACG CTGCCCGAGA CGCTCAACCG CTTCGTCACC
GCGAACCGCG CGAGCCTGTC GAACACGAGC GCCGCGTACC AGCTCGCGGA CGCGGCGCGC
GAAACGTTTC GCTTCCTGCG CTACCCGGCG CAGAAGCCGC GCGTGAAGAA GATGATCCAG
GACATGCTCG CGTCGACGAG CATGACGGGC GCGGACAGCG ACCTGTGGCT CGCGGCGGCG
GAAGCGGTCG ACTATGGCGA TCCGGGCAAC TGCGCGGACT ACGGCACGTG CGACTACAAG
AAGCGGCTCA CCGACGCGGT GCTCACGCAT CGTTACGCGT GCAACGCGGG CGTGCGCATT
CTCGCGCAGG ACATGACGCT GCCGCAGTTG CAGTCGGTCT GCACGTCGGT CGCGCAGCAG
GACGACTACT TCCACCGGAT GATGAAGACC GGGCGCAAGC CGGTGGCGGG CGACCGCAAC
GATACGATCG AGCTCGTCAT CTTCGACGAC TACGCGAACT ATCGAAAATA TGCTTCGGTG
ATCTACGGCA TCAGCACCGA CAACGGCGGC ATGTATCTCG AAGGCGATCC GTCCGCGCCC
GGCAACCAGG CGCGCTTCAT TGCGCACGAG GCGTCGTGGT TGCGGCCCGA GTTCAAGGTC
TGGAACCTCG AGCACGAGTT CACGCACTAT CTCGACGGCC GCTACGACAT GGCGGGCGAT
TTCGCGGCGA GCACCGCGAA GCCGACCGTC TGGTGGATCG AGGGTCTCGC CGAATATCTG
TCGAGAAAGA ACGACAATCA GGAGTCGATC GATGCGGCGC GCACGGGCGC GTACCGCTTC
TCGGACGTGC TCGGCACGCT GTATTCGTCG AGCGACTACG TCGCGCGCGC CTACCGTTGG
GGCTACATGG CGACACGCTT CATGTTCGAG CGCCATCGCG CGGACGTGGA CACGATCGTG
TCGCGCTTCC GGGTGGGCGA CTACGACGGC TACGCGAACT ACGTCGCGTA CATCGGCAAC
CGCTACGACG GCGAGTTCGT CGATTGGGCG CGCGCGGCGA CCACGGCGGG CGAGCCGCCG
CTGCCGACGA AGCGTTGA
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| Protein sequence | MTEVFRKTRR WSAVAALSAF VGLAGAASAN TQPMQPTQQK QARMPRLPQN LPVSPEQAEY
NLPLSEQDRA ALTRPSPLKQ PAKRGKRSAP GADCRDMSVM TQYRGAALAD YIANLPDYEC
HYGLFSVDKT LAAQIFSAEN VHAVASRFVQ DIYRYDASNL ILVNLLIYLR SAYYQYDVSG
IANPIPNLAV WLRPYIKQSL EGAALYRENA RAPSTANELM KFITNMKDEA FYLPTLKARI
AFYTASATNP QAAAPLLQPS AAGGFTGLLT VFFYAHQRSG AQPMLDSDAT LPETLNRFVT
ANRASLSNTS AAYQLADAAR ETFRFLRYPA QKPRVKKMIQ DMLASTSMTG ADSDLWLAAA
EAVDYGDPGN CADYGTCDYK KRLTDAVLTH RYACNAGVRI LAQDMTLPQL QSVCTSVAQQ
DDYFHRMMKT GRKPVAGDRN DTIELVIFDD YANYRKYASV IYGISTDNGG MYLEGDPSAP
GNQARFIAHE ASWLRPEFKV WNLEHEFTHY LDGRYDMAGD FAASTAKPTV WWIEGLAEYL
SRKNDNQESI DAARTGAYRF SDVLGTLYSS SDYVARAYRW GYMATRFMFE RHRADVDTIV
SRFRVGDYDG YANYVAYIGN RYDGEFVDWA RAATTAGEPP LPTKR
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