Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A1123 |
Symbol | |
ID | 4885692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | - |
Start bp | 1079583 |
End bp | 1080479 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640131063 |
Product | short chain dehydrogenase |
Protein accession | YP_001062122 |
Protein GI | 126443734 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCGCC GCCCGCCTCG CGCGCGCATC ACCAATATCG CGATGCGCAT CGTGCGCATC GCCGAACAAG AATCGCGATC ACTCGGGAGA CACCCACGCA TGGCTGCAAT CGATCTGCTG AAACCGTACG CCGGGCTGCG CGTACTCGTG ACGGGCGGCG CGTCCGGCAT CGGGCTCGCG ATCGCCGACG CGTTCGCCGA ATGCGGCGGC CAGGTCCACG TCTGCGACGC ATCCGGGAAG GCGCTCGCCG CGCTCGCGCA GCGCCCCTCG CGCGCCGCGC TCGGCACGAC GCTCGCCGAC GTCGCCGATG CGGCCGCGGT CGAGCGCGTG TTCGACGACG TCACGCGCAC GCTCGGCGGG CTCGACGTGC TCGTGAACAA CGCCGGCATC GCCGGGCCGA CGGGCGGCAT CGACGAGATC GATCCCGCGC AATGGGAACA GACGGTCGCG GTCAACCTGA ACGCGCAATT CCAGTTCGCG CGCCGCGCGG TGCCGATGCT GCGCGACGCG CCGCACGGCG GCGCGATCAT CGCGCTGTCG TCGGTCGCGG GGCGTCTCGG CTATGCGTTG CGCACGCCGT ACTCGGCCAC GAAATGGGCC GTCGTCGGCC TCGTGAAAAG CCTCGCGATC GAGCTCGGCC CGCTCGGCAT CCGCGTGAAC GCGATCCAGC CGGGCATCGT GCGCGGCCCG CGCATCCGCC GCGTGATCGA GGCGCGCGCC GCGCAACTCG GCATCGGCTA CGACGAGATG CAGGCGCGCT ATCTCGAGAA GATCTCGCTG CGCCGGATGA CCGATCCGGA CGAGATCGCC GCGACCGCGC TGTTCCTCTG CTCACCGGGC GGGCACGGGA TTTCCGGGCA GGCGATTTCC GTCTGCGGCA ACGTCGAGGC GCTCTGA
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Protein sequence | MRRRPPRARI TNIAMRIVRI AEQESRSLGR HPRMAAIDLL KPYAGLRVLV TGGASGIGLA IADAFAECGG QVHVCDASGK ALAALAQRPS RAALGTTLAD VADAAAVERV FDDVTRTLGG LDVLVNNAGI AGPTGGIDEI DPAQWEQTVA VNLNAQFQFA RRAVPMLRDA PHGGAIIALS SVAGRLGYAL RTPYSATKWA VVGLVKSLAI ELGPLGIRVN AIQPGIVRGP RIRRVIEARA AQLGIGYDEM QARYLEKISL RRMTDPDEIA ATALFLCSPG GHGISGQAIS VCGNVEAL
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