Gene BURPS668_A1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_A1022 
SymbolhpaR 
ID4885919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009075 
Strand- 
Start bp988130 
End bp988567 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content64% 
IMG OID640130962 
Producthomoprotocatechuate degradation operon regulator, HpaR 
Protein accessionYP_001062021 
Protein GI126445579 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID[TIGR02337] homoprotocatechuate degradation operon regulator, HpaR 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.299298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTA CGTTCGATCA CCGCAATCTG GCCATGCTGT TGCTCGAGGC CCGCGAAACG 
TTGATGGGCC GGTTCCGGCC GATCCTGAAG GAATTTGCGC TGACGGAGCA GCAATGGCGG 
ATCATTCGCG TGCTGGACGG CGAACCGTCT CATGAGCTCG AAGCCGGGCA GATCGCGAAG 
CGCTGCTGCA TCCTGAGCCC GAGCCTCACG GGCGTACTGG AGAGAATGGA GCGCGACGGC 
CTGATTCGCC GCACGCGCGC GCAGGAGGAC CAGCGCAGGC TGATCGTCAG CTTGACGCCG 
CAAAGTCGTC AGCTCGTCAC GCAGATCAGC CCGCGCATCG ACGAGCAGTA TCGGCTCATC 
GAGCAGCGCT TCGGCGCGGA TGCGCTCGGC GAGGTGTACG CGGCGCTCGA CAAACTGATC 
GACGTCGGCG GCTCGTGA
 
Protein sequence
MNRTFDHRNL AMLLLEARET LMGRFRPILK EFALTEQQWR IIRVLDGEPS HELEAGQIAK 
RCCILSPSLT GVLERMERDG LIRRTRAQED QRRLIVSLTP QSRQLVTQIS PRIDEQYRLI 
EQRFGADALG EVYAALDKLI DVGGS