| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0840 |
|---|
| Symbol | |
|---|
| ID | 4888741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 818782 |
|---|
| End bp | 819687 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640130780 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001061839 |
|---|
| Protein GI | 126444309 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTATGA CGAGACCAGA CCGTCTGCCG CCGATGCAGA CCTTGTCCGC GTTCGAAGCG
GCCGCGCGCC TCGCGAGCTT CACGGCCGCC GCGCGCGAGC TCGGCTCGAC GCAGCCGGCC
GTCAGCCAGC GCGTCGTTCA GCTCGAAGAG GATCTCGGCA CGCCGCTCTT CGAGCGCGGG
CGCCGCGGCG TCACGCTGAC AGAGGACGGC GCGCGGCTCT TCGCGGCGGT CCGCCAAAGC
CTCGACGCGC TGCGCGCCGC GACGGCGGAC ATCCGCAGCC GCCGCGCGAA CGGCACATTC
ACACTCGTCA CCGATTTCGG CTTCGCCACC TACTGGCTGA TGCCGCGCCT CGACGATCTG
AAGCGCGCGA TGCCCGGCGT CGACGTGCGC GTCGTCACAT CTCAGGACAT CGATCCGCAG
CGCGAGCACG CCGACGTCGC GATCCTGTTC GGCGCCGGCG ACTGGCCGGG CTGCACATCG
ACGCGGCTCT TTCAGGAGCA CGTGACGCCC GTGTGCTCGC CCGCGTTTCG CACCGCGCAT
GCCGATATCG CGCGGCCGGC CGACCTGTTG CGCGCGCCGC TGCTGCACGT GCAGCCGACG
CGCCCCGAGC GCTGGCTCGC GTGGCGCGAT TGGTTCGACG CGCATGGGCT CGCCGCGCCG
CCCGAGCCGC ACGGGCTGAC GTTCAACAGC TACTCGCTCG TGATTCAAGC GGCGCTGATG
AATCAGGGTG TCGCGCTCGG CTGGGCGCCG CTCGTCGACA CGCCGATCGC GGCCGGCCAG
CTCGTGCGGC TCGTCGACGC GCCCGTCGTC ACGCCGCGCG GCTACTACCT CGTTCTGCCG
CCCGCGCGGC CGGAGGCGCG CGCGGTGCCG CTCTTTCGCC GCTGGCTGCT CGGCGCATGC
GCATGA
|
|---|
| Protein sequence | MLMTRPDRLP PMQTLSAFEA AARLASFTAA ARELGSTQPA VSQRVVQLEE DLGTPLFERG
RRGVTLTEDG ARLFAAVRQS LDALRAATAD IRSRRANGTF TLVTDFGFAT YWLMPRLDDL
KRAMPGVDVR VVTSQDIDPQ REHADVAILF GAGDWPGCTS TRLFQEHVTP VCSPAFRTAH
ADIARPADLL RAPLLHVQPT RPERWLAWRD WFDAHGLAAP PEPHGLTFNS YSLVIQAALM
NQGVALGWAP LVDTPIAAGQ LVRLVDAPVV TPRGYYLVLP PARPEARAVP LFRRWLLGAC
A
|
|---|
| |