Gene BURPS668_A0482 details

Gene Information

• Locus tag: BURPS668_A0482
• Symbol: pcaF
• ID: 4886486
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009075
• Strand: +
• Start bp: 438390
• End bp: 439592
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 640130423
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: YP_001061488
• Protein GI: 126443198
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.807592
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAAG CATTCCTGTG TGACGCAATC CGCACGCCCA TCGGCCGCTA CGGCGGCGCG 
CTGGCGCCGG TGCGGGCCGA CGACCTCGGC GCGGTGCCGC TCAAGGCGCT CGTCGAGCGC 
AACCGCGACG TCGACTGGGC CGCCGTCGAC GACGTGATCT ACGGCTGCGC GAATCAGGCC 
GGCGAGGACA ACCGCAACGT CGCGCGCATG TCGCTGCTGC TCGCCGGCTT GCCGCACGCC 
GTGCCCGGCG CGACGATCAA CCGCCTCTGC GGCTCCGGGA TGGACGCGAT CGGCCTCGCC 
GCGCGCGCGA TCAAGGCGGG CGAAGCGAGC CTGATGATCG CCGGCGGCGT CGAGAGCATG 
AGCCGCGCGC CGTTCGTGAC CGGCAAGGCG ACGAGCGCGT TCTCGCGCCA GGCCGAGATC 
TTCGATACGA CCATCGGCTG GCGCTTCGTC AATCCGCTGA TGAAACAGCG GTACGGCGTC 
GATTCGATGC CGGAGACGGC CGAAAATGTC GCGACCGATT ACCGCGTGAG CCGCGCCGAT 
CAGGACGCGT TCGCGCTGCG CAGCCAGCAG AAGGCGGCGC GCGCGCAGGC CGACGGCACG 
CTCGCGCAGG AGATCGCGCC GGTGACGATC GCGCAGAAGA AGGGCGAGCC GCTCGTCGTG 
GCGCGCGACG AGCATCCGCG CGAGACGACC CTCGAGGCGC TCGCGAAGCT CAAGGGCGTG 
GTGCGCCCGG ACGGCACGGT GACGGCGGGC AACGCGTCGG GCGTGAACGA CGGTGCGTGC 
GCGCTGCTGG TGGCGAGCGA GGCGGCGGCG CGCCGCCACG GGCTCGTGCC GCGCGCGCGC 
GTGCTGGGGA TCGCGACGGC GGGCGTGGAG CCGCGGGTGA TGGGGATCGG CCCGGCGCCG 
GCGACGCAGA AACTGCTCGC GCGGCTCGGG ATGACGCTCG ACCAGTTCGA CGTGATCGAG 
CTGAACGAGG CGTTCGCGTC GCAGGGGCTC GCGGTGCTGC GGCTGCTGGG CGTCGCGGAC 
GACGATGCGC GGGTGAATCC GAACGGCGGC GCGATCGCGC TCGGGCATCC GCTTGGCGCG 
TCGGGCGCGC GGCTCGTGAC GACCGCCACG TATCAGCTGC ACCGCACGGG CGGCCGCTTC 
GCGCTCTGCA CGATGTGCAT CGGCGTCGGC CAGGGCATCG CGATCGCGAT CGAGCGCGTG 
TGA 

 

Protein sequence

MTEAFLCDAI RTPIGRYGGA LAPVRADDLG AVPLKALVER NRDVDWAAVD DVIYGCANQA 
GEDNRNVARM SLLLAGLPHA VPGATINRLC GSGMDAIGLA ARAIKAGEAS LMIAGGVESM 
SRAPFVTGKA TSAFSRQAEI FDTTIGWRFV NPLMKQRYGV DSMPETAENV ATDYRVSRAD 
QDAFALRSQQ KAARAQADGT LAQEIAPVTI AQKKGEPLVV ARDEHPRETT LEALAKLKGV 
VRPDGTVTAG NASGVNDGAC ALLVASEAAA RRHGLVPRAR VLGIATAGVE PRVMGIGPAP 
ATQKLLARLG MTLDQFDVIE LNEAFASQGL AVLRLLGVAD DDARVNPNGG AIALGHPLGA 
SGARLVTTAT YQLHRTGGRF ALCTMCIGVG QGIAIAIERV