Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0385 |
Symbol | prpF |
ID | 4888823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 352031 |
End bp | 353221 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640130326 |
Product | AcnD-accessory protein PrpF |
Protein accession | YP_001061391 |
Protein GI | 126442653 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.957828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCACG TACCTCAAAT CAAGATTCCC GCGACCTACC TGCGCGGCGG CACCAGCAAG GGCGTGTTCT TCCGGCTGCA GGATCTGCCC GAGGCCGCGC GAACGCCGGG CGCCGCGCGC GACGCGCTGC TCTCGCGCGT GATCGGCAGC CCCGACCCGT ACGGCAAGCA GATCGACGGC ATGGGCGGCG CGAGCTCGAG CACGAGCAAG ACGGTGATCG TCTCGAAGAG CGCGCGGCCC GATCACGACG TCGACTACCT GTTCGGTCAG GTGTCGATCG ACAAGCCGTT CGTCGACTGG AGCGGCAACT GCGGCAACCT GTCGGCGGCC GTCGGCCCGT TCGCGATCGC GGGCGGCCTG ATCGACCCGG CGCGCGTGCC GGAGAACGGC GTCGCGACCG TGCGGATCTG GCAGGCGAAC ATCGGCAAGA CGATCGTCGC GCACGTGCCG ATCACGAACG GCGCGGTGCA GGAGACGGGC GATTTCGAGC TCGACGGCGT GACGTTCCCG GCCGCCGAGG TGCAGCTCGA ATTCATGGAC CCGGCCGCCG ACGAGGACGG CGCGGGCGGC GCGATGTTCC CGACAGGCAA CCTCGTCGAC GATCTCGACG TGCCGGGCGT CGGCACGCTG AAGGCGACGA TGATCAACGC GGGCATTCCG ACGATCTTCG TCGACGCCGC GGCGATCGGC TACACCGGCA CCGAGCTGCA GGACGCGATC AATTCGGACG CGAAGGCGCT CGCGATGTTC GAGACGATCC GCGCGCACGG CGCGCTGCGC ATGGGCCTCA TTGCGTCGCT CGACGAGATC GCGACGCGCC AGCACACGCC GAAGGTGGCG TTCGTCGCGA AGCCGGCGGA TTACGTCGCG TCGAGCGGCA AGCGCGTCGC GGCGGCCGAC GTCGACCTGC TCGTGCGCGC GCTATCGATG GGCAAGCTGC ATCACGCGAT GATGGGCACG GCGGCGGTGG CGATCGGCAC CGCGGCGGCG ATTCCGGGCA CGCTCGTGAA TCTCGCGGCG GGCGGCGGCG CGCGCCACGC GGTGCGCTTC GGCCATCCGT CGGGCACGCT GCGCGTCGGC GCGGAGGCGA AGCAGGACGG CGGCGAGTGG GTCGTCACGA AGGCGATCAT GAGCCGCAGC GCGCGCGTGC TGATGGAGGG CTGGGTGCGC GTGCCGGGCG ACGCGTTCTG A
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Protein sequence | MAHVPQIKIP ATYLRGGTSK GVFFRLQDLP EAARTPGAAR DALLSRVIGS PDPYGKQIDG MGGASSSTSK TVIVSKSARP DHDVDYLFGQ VSIDKPFVDW SGNCGNLSAA VGPFAIAGGL IDPARVPENG VATVRIWQAN IGKTIVAHVP ITNGAVQETG DFELDGVTFP AAEVQLEFMD PAADEDGAGG AMFPTGNLVD DLDVPGVGTL KATMINAGIP TIFVDAAAIG YTGTELQDAI NSDAKALAMF ETIRAHGALR MGLIASLDEI ATRQHTPKVA FVAKPADYVA SSGKRVAAAD VDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGARHAVRF GHPSGTLRVG AEAKQDGGEW VVTKAIMSRS ARVLMEGWVR VPGDAF
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