| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A0334 |
|---|
| Symbol | |
|---|
| ID | 4887417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | - |
|---|
| Start bp | 299677 |
|---|
| End bp | 300258 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640130275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001061340 |
|---|
| Protein GI | 126442861 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAT CCAGCAGCTC TCAAAAATTC ATCGCGCGCA ACCGCGCGCC CCGCGTGCAG
ATCGAATACG ACGTCGAAGT CTACGGCTCG GAAAAGAAGG TCGAACTGCC GTTCGTGATG
GGCGTGCTCG CCGACCTGTC GGGCAAGCCG GTCGCGCCGC TGCCCGCCGT CGCCGACCGG
CGCTTCCTCG ACATCGACAT CGACAACTTC GACGAGCGGA TGAAGGCGAT CAAGCCGCGC
GTGGCGTTCG CGGTGGACAA CACGCTGTCG GGCGACGGGC AGCTGATGGT CGACATGACG
TTCGAAAGCA TCGAGGACTT CTCGCCCGCC GCGATCGCGC GAATGGTCGG CCCGTTGCGG
CAATTGCTCG AGGCGCGCAC GCAGCTCGCG AACCTGCAGA CCTACATGGA CGGCAAGTCC
GGCGCCGAGA CGCTCGTCAA CCAGTTGCTG CAGGACCCGG CGCTGCTGCG CTCGCTCGCG
GCCGCGCCGA AGCCGCAGCT CGCGGGCGGG CCGGACGCGG GCAATGCGCG CGGCGCGAAG
GACGCGCCCG ACACGGCGAA CCACGACAGC GATGCGGCCT GA
|
|---|
| Protein sequence | MSASSSSQKF IARNRAPRVQ IEYDVEVYGS EKKVELPFVM GVLADLSGKP VAPLPAVADR
RFLDIDIDNF DERMKAIKPR VAFAVDNTLS GDGQLMVDMT FESIEDFSPA AIARMVGPLR
QLLEARTQLA NLQTYMDGKS GAETLVNQLL QDPALLRSLA AAPKPQLAGG PDAGNARGAK
DAPDTANHDS DAA
|
|---|
| |