Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_A0223 |
Symbol | fliF |
ID | 4888150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009075 |
Strand | + |
Start bp | 202923 |
End bp | 204521 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640130164 |
Product | flagellar MS-ring protein |
Protein accession | YP_001061229 |
Protein GI | 126442789 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATGCCTT CGCCGGCCGC GCTGTCGCGA CTGCTTCCGC TCGTCGTGCT CGCGGTCGCG TTGACTGCCG CGGCAACGCT CTACATGCGC TACGACCAGG CGAATTACAA GCCGCTGTTC GGTGCGCGCG AGCCGGTGCA ACTCGATGAC GTCGTGTCGA CGCTCGACGC CCAGCGCATC CCGTACCGCA TCCATCCGGA TACCGGGCAG GTGCTCGTCG CCCGCTCGGA CGTCGCGCGC GCGAGGATGA CCCTCGCCGC GCGCGGCGTC ACCGCGAAGG CCGCGCCGGG GCTCGAGCAG ATCGATCAGG ACGATCCGCT CGGCACGAGC CAGTTCGTGC AGGACGTGCG ATTCCGCCGG GGCCTCGAGA GCGAATTGGC GCAAAGCATC GCGACGCTCG AACCGGTCGA GCGCGCCCGC GTGCATTTGT CGATTGCGAA GTCATCGTCG TTCGTGATGA TGGACGGCGA CAAGAGCGCC GCCTCCGTCG TGCTGACGCT CAAGCCGGGA AGGCGTCTTG CGAAGGAGCA GATCGCCGCG GTCATCAATC TCGTCGCCGG CAGTGTGCCG AATCTGGCGC CGGCAAAGGT TTCGGTCGTC GATCAGCATG GCGCGTTTCT GTCCGCGCGC GTCGACCTGG ACGGTGATCT GACGGGCACG GACGAGATCG CGGCGCGGTT TCGCGAAGAC GTGACACGCA ATGTCGAGGA TCTGCTGGCG CCGTCGCTCG GCCTCGGGAA TTTCCGCGTC AGCGTGACGG CGCTCGTCAA CAACGACCGT GTCGAGGAAA CGCGCGAGCA GTTCGGCGAA GCGCCGAAGG TGATGAACGA GGCGACCCGC AACGAGCAGA ACCGCGATCG CGTCGCGCTC GGCGTACCGG GCTCCTTGAG CAACCGTCCG GTCGACGTGC CCGCGTCCGA GCCGCAGGCC GACGGCGGCA CGCAACGCGC CGCGACGACG CGCCAGTTCG CATACGACCG CAACATCACG CAGATCAAGC GTGGGCGCGG GCAGCTCGAG AAGCTCAGCG TCGCCGTCGT TCTCAACAAC GCCGTGTCGC CCGCCAAGGG CAAGCCCTGG TCGCCGGAGC AATTGCGGCG AATCGACGAG ATCCTGCGCA GCGGACTCGG CATAGACAAG CAGCGCGGCG ATCAACTGAT CGTGTCGTCG CTCGATTTCG CGGCGCCGGC CGCTGCCGAG CCGTGGTGGA AGGAGCGCGA CACCCTCGAG CAGGGCGGCT GGTATCTGAC CTATGCGCTG GCGGCCCTGT TCGGCTATCT GGCGCTCGCT CGCCCCATGC TGCGCATGCT CCAGCAATGG GTGCAGCACC GTTATGGCGC GCCGGCCGCC GCTGCTTCGG CGTCCAGGCT GCCGGCCCCC GAGGGCGGCC ACGCGCAAGC GGCACTGCCG GCCGCGGACG ACGCGCGGCC GCCCTTGGCG GCGATGTTGC CTCTCCTCGA TGACGTGGAG CTGCCACCTG CCGATTCGGG CGTGGAGGTG CTGATCGACC ACTTGCGTTC GCTCTCCGAG AAGGAGCCCG AGCGCGTCGC TGAAGTCGTC AAACAATGGA TACGGAATGA TGGAAACGCC AGTAGCTGA
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Protein sequence | MMPSPAALSR LLPLVVLAVA LTAAATLYMR YDQANYKPLF GAREPVQLDD VVSTLDAQRI PYRIHPDTGQ VLVARSDVAR ARMTLAARGV TAKAAPGLEQ IDQDDPLGTS QFVQDVRFRR GLESELAQSI ATLEPVERAR VHLSIAKSSS FVMMDGDKSA ASVVLTLKPG RRLAKEQIAA VINLVAGSVP NLAPAKVSVV DQHGAFLSAR VDLDGDLTGT DEIAARFRED VTRNVEDLLA PSLGLGNFRV SVTALVNNDR VEETREQFGE APKVMNEATR NEQNRDRVAL GVPGSLSNRP VDVPASEPQA DGGTQRAATT RQFAYDRNIT QIKRGRGQLE KLSVAVVLNN AVSPAKGKPW SPEQLRRIDE ILRSGLGIDK QRGDQLIVSS LDFAAPAAAE PWWKERDTLE QGGWYLTYAL AALFGYLALA RPMLRMLQQW VQHRYGAPAA AASASRLPAP EGGHAQAALP AADDARPPLA AMLPLLDDVE LPPADSGVEV LIDHLRSLSE KEPERVAEVV KQWIRNDGNA SS
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