| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_3572 |
|---|
| Symbol | gabP |
|---|
| ID | 4883199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 3504417 |
|---|
| End bp | 3505820 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640129500 |
|---|
| Product | GABA permease |
|---|
| Protein accession | YP_001060577 |
|---|
| Protein GI | 126439581 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAA GTCAGACAGG CCTCGGAACC GGCCTGAAGC AGCGTCACGT CACGATGCTG
TCGATCGCGG GCGTGATCGG CGCCGGGTTG TTCGTCGGTT CGGGGCATGC GATCGCGGAG
GCCGGGCCGG CCGCGCTGAT CGCGTACGCG ATCGCGGGGC TGCTCGTCGT GCTCGTGATG
CGCATGCTCG GCGAGATGGC GGTTGCGCAG CCGGACAGCG GTTCGTTCTC GACCTACGCC
GATCGCGCGA TCGGCCATTG GGCGGGCTTC ACGATCGGCT GGCTCTACTG GTGGTTCTGG
GTGCTCGTGA TTCCGATCGA GGCGACGGCC GCCGCGACGA TCCTCAATGC GTGGTTCCCC
GGCGTCGCGA CATGGATCTT CGCGCTCGGC ATCACGTCGG TGCTCACCGT CACGAATCTC
TTCTCGGTCA AGAACTACGG CGAATTCGAA TTCTGGTTCG CGCTCATCAA GGTGGTGGCG
ATCGTGGTGT TCCTCGCGAT CGGCGGCGCG GCGATCGTCG GCCTGCTGCC GGGCTCGAAC
GTATCGGGCG CGGCGCGCCT CGTGAACGCG GGCGGCTTCA TGCCGAACGG CGTCGGCGCG
GTGCTCGCCG CGATGCTGAC GACGATGTTC TCGTTCCTCG GCACCGAGAT CGTCACGATC
GCCGCGGCCG AATCCGAGCA TCCGGAGCGC CAGATCGTCC GCGCGACGAA TTCGGTGATC
TGGCGCATCT CGCTGTTCTA TCTCGGCTCG ATCTTCGTCG TCGCGGCGCT CGTGCCGTGG
AACGACGCGC TGCTGCCCGC GCACGGCTCG TATCAGCGCG CGATGGAGCT GATCGGCGTG
CCGCACGCGA AGGGCATCAT CGACGTGATC GTGCTGGTGT CGGTTGCGAG CTGCCTGAAT
TCGGCGCTCT ACACGGCGTC GCGCATGATC TTCTCGCTGT CGACGCGCGG CGACGCGCCG
GCATTCTTGC GCCGCACCGA TGCAAGCGGC ACCCCGCGCG CGGCGGTGCT CGCGTCGACG
GCGTTCGGCT TTCTGACGGT GATCGCGAAC TACGTGATGC CCGAGCAGGT GTTCGGCTTC
CTGCTCGCGA CGTCGGGCGC GATCGCGCTG CTCGTCTATC TCGTGATCGC GATCTCGCAA
CTGCGGATGC GCTCGACGCT CGACGCGACG GGCGAGCGGC TGCCGCTGCG GATGTGGTGC
TTTCCGTGGC TCACGTGGGC GGTGATCGTG TTCATCTGCG GCGTGCTCGT CGTGATGCTG
CTGCGCGAGG ATCACCGGAT GGAAGTCGGC GCGACCGCGG TGCTTGCGCT CGCCGTCGTC
GTCGCATCGC GGATGAACCG GCGCGCGCGC GGCGGCGACG AGCCGACGCC CGCCGCGTCG
CGAGTGTCCG CTAACCTGCG GTGA
|
|---|
| Protein sequence | MEGSQTGLGT GLKQRHVTML SIAGVIGAGL FVGSGHAIAE AGPAALIAYA IAGLLVVLVM
RMLGEMAVAQ PDSGSFSTYA DRAIGHWAGF TIGWLYWWFW VLVIPIEATA AATILNAWFP
GVATWIFALG ITSVLTVTNL FSVKNYGEFE FWFALIKVVA IVVFLAIGGA AIVGLLPGSN
VSGAARLVNA GGFMPNGVGA VLAAMLTTMF SFLGTEIVTI AAAESEHPER QIVRATNSVI
WRISLFYLGS IFVVAALVPW NDALLPAHGS YQRAMELIGV PHAKGIIDVI VLVSVASCLN
SALYTASRMI FSLSTRGDAP AFLRRTDASG TPRAAVLAST AFGFLTVIAN YVMPEQVFGF
LLATSGAIAL LVYLVIAISQ LRMRSTLDAT GERLPLRMWC FPWLTWAVIV FICGVLVVML
LREDHRMEVG ATAVLALAVV VASRMNRRAR GGDEPTPAAS RVSANLR
|
|---|
| |