Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3331 |
Symbol | secF |
ID | 4883012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3270269 |
End bp | 3271219 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640129259 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001060342 |
Protein GI | 126439004 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0935512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCTTTCATGC GGCACGCGTT GGTCTTCAAC GTGGTCTCGC TCGTGACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCATCG CGGGCTGCAT CTGTCCGTCG AATTCACGGG CGGCACCGTG ATCGAAGTGC AGTACCAGCA GGCCGCGCAG CTCGAACCCG TGCGCGCGAC GCTCGGCACG CTCGGCTACG CCGACGCGCA GGTGCAGAAC TTCGGCACGT CGCGCAACGT GCTGATTCGC CTGCCGCTCA AGCAGGGCCT CACGTCCGCG CAGCAGAGCG ACCAGGTGAT GGCCGCGCTG AAGGCGCAGC ACGCCGACGT CGCGCTGCAG CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG CCTGCTCGCG CTCGCGTGCG TCGTGATCGG CATCGTCATC TATCTGTCGT TCCGCTTCGA ATGGAAGTAC GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCG TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCGGCGG TGCTCGCGGT GCTCGGCTAC TCGGTCAACG AATCGGTCGT CATCTTCGAC CGGATCCGCG AGACGTTCCG CCGCGAGCGC AAGATGACGG TGCAGGAAGT GATCAACCAT GCGATCACGA GCACGATGTC GCGCACGATC ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA TTCGTCGGTG TTCGTCGCCG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAGGATCT CGTCAAGGAG AAGAAGTCCG CGCACGATCC GAACGATCCG AACGCGGGCG CGCAGGTGTA A
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Protein sequence | MEFFRIRKDI PFMRHALVFN VVSLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ LEPVRATLGT LGYADAQVQN FGTSRNVLIR LPLKQGLTSA QQSDQVMAAL KAQHADVALQ RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DVVIILGFFA FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KMTVQEVINH AITSTMSRTI ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLVKE KKSAHDPNDP NAGAQV
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