Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3271 |
Symbol | pcnB |
ID | 4882780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3205398 |
End bp | 3206945 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640129199 |
Product | poly(A) polymerase |
Protein accession | YP_001060282 |
Protein GI | 126442154 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.264957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAAAA AACTCATCCG CAAGCTGCTC GGGCAGGACG CCCGTACGGC GCAAGACGCG CCGCAGGACC CGGCCGAGCC GCGCTCGGCC GCGCCCGCCG CCCCGGCGGG CCGCGCGAAA CCCGCGCGCG GCGCCGCGAA GAAACCCCGC AACGGCGCGC CGACCATCGT GCACGCCGAC GTGCACGGGA TCGACCCCGC GCTCATCTCG AAAAACGCGA TCCGCGTGAC CGACACGCTG CAGCAAGCCG GCTTTCGCGC ATTCATCGTC GGCGGCGCGG TGCGCGACCT GCTGCTCGGC ATCGCGCCGA AGGATTTCGA CGTCGCGACC GACGCGACGC CAACCGAAGT CCAGCGCCTG TTCCGCCGCG CGCGGCTGAT CGGCCGGCGC TTCCAAATCG TCCACGTGCA GTTCGGCCAG GAGCTGATCG AGGTGTCGAC GTTCCGCGCG CTCGTCGACG CGCCGCAGGA GCCGCCCGCC GACGCCGCGC CCGCGAAGCG CCTGAAGCGC GACGAGCTCG ACCGCCGCAC GCATGCGGTG GACGCGAGCG GGCGCGTGCT GCGCGACAAC GTGTGGGGCG AGCAGCACGA GGACGCGGCG CGCCGCGATT TCACGATCAA CGCGATGTAC TACGATCCCG CATCGCAGAC CGTGCTCGAT TACCACGACG GGATGGCCGA CATGCGCGCG CGCCTGTTGC GCATGATCGG CGATCCGGCG ACGCGCTACC GCGAGGATCC GGTGCGGATG CTGCGCGTGG TGCGCTTCGC GGCGAAGCTC GGCTTCGACA TCGAGGAGAA GACACGCGAG CCGATCAAGG AGCTCGCCGA TCTGATCAAC AACGTGCCGG CCGCGCGCCT GTTCGACGAG ATGCTCAAGC TCCTGCTGTC GGGCCACGCG CTCGCGTGCC TGAAGCAGTT GCGCAAGCAG GGGCTGCACC ACGGGTTGCT GCCGCTTCTC GACGTCGTGC TCGAGCAGCC GCAGGGCGAG AAGTTCGTCA CGCTCGCGCT GAACAACACC GACGCGCGCG TGCGCGCGGG CAAGCCGGTG TCGCCCGGCT TCCTGTTCGC GACGCTGCTG TGGCACGACA TGCGCCAGCG CTTCGAGCAG TATTCGGCCG ACGGCGAGTT CCCGGTGCCC GCGCTGCATC GCGCGATGGA CGACGTGATC GACATGCAGA CCGAGAAGCT CGCGATCCAC AAGCGCTATT CGGCCGACAT GCGCGAGATC TGGGGGTTGC AGTTGCGCCT CGAGAAACGC AGCGGCCGCA GCGCGCTGCG GCTGCTGGAA CACCAAAGAT TCAGAGCGGG GTATGATTTC CTCCTGTTAC GCTGCGAATC CGGCGAGCTC GATCCGGCCG TCGGACAGTG GTGGACGGAT TTCATCGACG GCGACGCCGC GACGCGCGAG GCGCTCCTCA CGCAGGGCGG CAGTCGGGAC AAGTCGCCCC GCAAGCGGCG CCGCCGCGGC GGACGCAGCC GCCGGACGGC CGACAGCGCC GAGGGCGCGG AAGGCGCCGC GCGCGGCGAG TCCGACGCGA ACGACTGA
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Protein sequence | MIKKLIRKLL GQDARTAQDA PQDPAEPRSA APAAPAGRAK PARGAAKKPR NGAPTIVHAD VHGIDPALIS KNAIRVTDTL QQAGFRAFIV GGAVRDLLLG IAPKDFDVAT DATPTEVQRL FRRARLIGRR FQIVHVQFGQ ELIEVSTFRA LVDAPQEPPA DAAPAKRLKR DELDRRTHAV DASGRVLRDN VWGEQHEDAA RRDFTINAMY YDPASQTVLD YHDGMADMRA RLLRMIGDPA TRYREDPVRM LRVVRFAAKL GFDIEEKTRE PIKELADLIN NVPAARLFDE MLKLLLSGHA LACLKQLRKQ GLHHGLLPLL DVVLEQPQGE KFVTLALNNT DARVRAGKPV SPGFLFATLL WHDMRQRFEQ YSADGEFPVP ALHRAMDDVI DMQTEKLAIH KRYSADMREI WGLQLRLEKR SGRSALRLLE HQRFRAGYDF LLLRCESGEL DPAVGQWWTD FIDGDAATRE ALLTQGGSRD KSPRKRRRRG GRSRRTADSA EGAEGAARGE SDAND
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