Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3099 |
Symbol | |
ID | 4885664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3042901 |
End bp | 3044298 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640129027 |
Product | putative lipopolysaccharide ABC transporter, ATP-binding protein |
Protein accession | YP_001060111 |
Protein GI | 126442062 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.56935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGCAA TCAGCGTCCA AGACGTCAGC AAGCGCTTTC GCGTATTTGC CAAGCCGGCA GACCGTCTGA AGGCCGCAGT TCGGCATCGC ATCGGCGGTC TCGCGAAGTT GGTGCCCGCT CGTTTGCTCG GAACGGAAGG TGCAAGCGAG TTTCATGCGC TGCAGCATGT GTCGTTTCAC GTACAAAAGG GCGAGACGAT CGGAATCATC GGCCGCAACG GCTCGGGAAA GTCGACGTTG TTGCAGATCA TCTGCGGGAC GCTCACGCCG TCGGGTGGCC GGGTTGCGAT CAACGGGCGC GTCGCCGCGC TGCTCGAACT CGGAGCGGGC TTCAATCCGG AGTTCACTGG CCGCGAAAAC GTATACATGA ACGCGGCGTT GCTGGGCCTC TCGAAAGCCC AGATCGAGGA GCGGCTCGAC GCCATCTTCG CTTTTGCCGA TATTGGCGGC TTCGTGGATC AACCGGTGAA GACCTATTCG AGCGGCATGT ACGTGCGGCT TGCTTTTGCC GTCATTGCGC ACGTCGACGC CGACGTGCTC GTGATCGACG AAGCGTTGGC CGTCGGGGAC GCATTCTTCA CGCAAAAGTG CATGCGTTTT CTGCGCGCGT TCATGGAGCG GGGTACCGTT TTATTTGTCA GCCACGATAC GAACGCGGTG GTCAATCTCT GTACCCGCGT CGTATGGCTT GACAAGGGGC GCGTTCGCGA AATCGGTCCG GCAAAGGACG TTTGCGACTC GTATCTTGAG GCTTTCTACG AGGAGCAGCA TCGCGCATCG GGGCGAAGCG TTCGCGCGCT TGAGCGCAGC AGTGTCGTGC GCGCAATAGC CGAAGGCGAT ATGCGCGACC AGCGCGCATT GCTCATCAAC GCGTCGAAGC TGCGCAACGA CGTGGAGTTG TTCCAGTTCG CTGCCGACGC GAAGAATTTC GGTCTTGGCG GCGCATCGAT TGAGCATGTC GGCATCGAGG ATGGCACGGG GGCGCCGCTG AATTGGGTAG TGGGAGGCGA GATCGTTTGC ATCCGCATCG CCGTCAAAGC CCTGCAGAAC CTGGAGCGCG CCATCGTCGG ATTCATTGTC CGGGATCGGC TCGGGCAAAA TCTGTTTGGC GACAACACGT ATCTCACGAC CCTCAACGAG CCGTTCGCTG TCGCGGCGGG CGAAAGTTTT TCGGTCCGAT TCGGGTTCAG AATGCCGGTC TTGCCGGTAG GCGATTATTC GGTGACGGTT GCAGTCGCCG ACGGTTCACA AAGCGACCAC GTGATCCACC AATGGCTGCA CGATGCGGTG TTGTTGAAGT CGCATTCGAC GAGTGTCAGT ACAGGATTAA TAGGTATTCC AATGCATGAG ATCGTGCTTG AGCGGGATAC GCTGAACGAA GTTGGGGCGG CGCAATGA
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Protein sequence | MPAISVQDVS KRFRVFAKPA DRLKAAVRHR IGGLAKLVPA RLLGTEGASE FHALQHVSFH VQKGETIGII GRNGSGKSTL LQIICGTLTP SGGRVAINGR VAALLELGAG FNPEFTGREN VYMNAALLGL SKAQIEERLD AIFAFADIGG FVDQPVKTYS SGMYVRLAFA VIAHVDADVL VIDEALAVGD AFFTQKCMRF LRAFMERGTV LFVSHDTNAV VNLCTRVVWL DKGRVREIGP AKDVCDSYLE AFYEEQHRAS GRSVRALERS SVVRAIAEGD MRDQRALLIN ASKLRNDVEL FQFAADAKNF GLGGASIEHV GIEDGTGAPL NWVVGGEIVC IRIAVKALQN LERAIVGFIV RDRLGQNLFG DNTYLTTLNE PFAVAAGESF SVRFGFRMPV LPVGDYSVTV AVADGSQSDH VIHQWLHDAV LLKSHSTSVS TGLIGIPMHE IVLERDTLNE VGAAQ
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