Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3047 |
Symbol | |
ID | 4882292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 2991895 |
End bp | 2993040 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640128975 |
Product | phage integrase |
Protein accession | YP_001060060 |
Protein GI | 126441280 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.182322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCA TCCGTCGAAA CAACAGCAAG AACTGGTACT ACCAGTTCCA GATTCAGGGC AAGAAGTTCT TCGGTTCAAC GGGGACGCCG AACAAGACGA AGGCCGCTCA GGTCGAACGC GAGATGCGCA ATCGAGCCCA CGCCGAGCAG TACCTCGGGG ATGCGCAGCC CATTACGCTC AAAGATGCGC TGGAACAATA TGTCGAGGCA CGAAGCGACA CGTCCTATCA CAGGAACATG TGCTCGATCG TTCGAAAGAC GCTCGGCTAT AAGCTTCATC CGCGGACGAA GGCCAAGCTC CCCTGCTATG GCATGTTGCC TGATACGCTG CTGCATGAAC TGACGACGCG CGATTTCGAT CTTCTCGCTG CGAAGCGCAA GGCCGAAGGC GACAAACCAG CGACGATCAA GCATGAGATC GGTCTCCTTC GAGCGACCAT CAACGAGATG GCGAAGCTCG GATTCAAAGT CAGTCGTGAG ATCGTTTTTC CAGAGCTTAG GACTTCGTAT AGGCTTCGAT ATCTGGATTC TAACGACGAG TCGGCGTTAT TGCGCGAACT CGATCCGGAA CGGCTTAGAG CGCGTATAAA CGCGTCTAAA CCGCAAACAC CTGAAATGAC GCGAAATATG CAGGATAACT ACGATATCAC GGTTTTCCTG CTCGATACGG GGTGCCGTTA CTCGGAGGTC GCGAACATTC CGTGGTCGGC GATCAACCTC GACACGTGCA CGATCAGCCT CTATCGGAGC AAGGTGCGAA ATGAAGATGT GCTGCACATG ACCTCCCGAC TCGAAGCGAT CCTCCGTCGG CGGTGGGAAG AACGCAGGAC CGGACAGCGA TACGTATTCG AAGACCGCAC CGGCAACGAG CGAGGCTACA GCACGAAGTC GATCAAGAAG GCGATCGAGC GCGCTGGCCT CAACGATCCC GTTCTTGTAA AAGAACGCGG TGGGCGCGTC ACGCTGCATA CGCTGCGACA TACGTTCGCG AGTAAGCTAG TTAAGGCGGG CGTCAGTCTC TATGAGGTAT CGGTCCTGCT CGGCCACAGC GATCCGAAAA TGACGCAGCG CTATGCCCAC CTGAGCCCGA ACGACGCGAG CCGGAAGGCC GTCAAGGTCA TCGATTCGCT ACTGCAACCC TCCTGA
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Protein sequence | MTLIRRNNSK NWYYQFQIQG KKFFGSTGTP NKTKAAQVER EMRNRAHAEQ YLGDAQPITL KDALEQYVEA RSDTSYHRNM CSIVRKTLGY KLHPRTKAKL PCYGMLPDTL LHELTTRDFD LLAAKRKAEG DKPATIKHEI GLLRATINEM AKLGFKVSRE IVFPELRTSY RLRYLDSNDE SALLRELDPE RLRARINASK PQTPEMTRNM QDNYDITVFL LDTGCRYSEV ANIPWSAINL DTCTISLYRS KVRNEDVLHM TSRLEAILRR RWEERRTGQR YVFEDRTGNE RGYSTKSIKK AIERAGLNDP VLVKERGGRV TLHTLRHTFA SKLVKAGVSL YEVSVLLGHS DPKMTQRYAH LSPNDASRKA VKVIDSLLQP S
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