Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2800 |
Symbol | |
ID | 4885125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2763707 |
End bp | 2764366 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640128728 |
Product | HAD superfamily hydrolase |
Protein accession | YP_001059821 |
Protein GI | 126439898 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00584417 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGAC AGCAATTTGA TCTGATCGTC TTCGACTGGG ACGGCACGCT GATGGATTCG ACCGCGCACA TCGCGCAGTG CATCCAGGCC GCGTGCCGCG ATCTCGGCGT GCCCGCGCCG TCCGACGAGG CCGCCCGCTA CGTGATCGGG CTCGGCCTGC GCGACGCGCT GGCCGTGACC GCGCCGAGCG TCGATCCCGC CGATTATCCG CGGCTCGCCG AGCGCTACCG GTTTCACTAT CTGGTCAAGG ATCAGCGAAC CGAGCTCTTC GGCGGCGTGC GCGAGATGCT GGAAGAGCTG CGCGACACGG GCTACCTGCT GGCCGTCGCG ACGGGCAAGG GGCGCGTCGG GCTGAATCGC GCGCTCGATC AGGCGAAGCT CACGAGCCTC TTCGACGCCA CGCGCTGCGC GGACGAGACA TTCTCGAAGC CGCATCCGGC GATGCTGCAG GAATTGTCGC GCGAATTGGG GCAGGATCTG GCCCGCACCG TGATGATCGG CGACACCACG CACGATCTGC AGATGGCGGC GAGCGCGGGC GCCGCGGGCG TCGGCGTCGC GTACGGCGCG CATTCGGCCG ACGCGCTCGC GGCGCTGTCG CCGCGCTTCG TCGCGGCCGA CGTCGCGGCG CTCGCCGGCT GGCTGCGGGA GCACGCATGA
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Protein sequence | MARQQFDLIV FDWDGTLMDS TAHIAQCIQA ACRDLGVPAP SDEAARYVIG LGLRDALAVT APSVDPADYP RLAERYRFHY LVKDQRTELF GGVREMLEEL RDTGYLLAVA TGKGRVGLNR ALDQAKLTSL FDATRCADET FSKPHPAMLQ ELSRELGQDL ARTVMIGDTT HDLQMAASAG AAGVGVAYGA HSADALAALS PRFVAADVAA LAGWLREHA
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