| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_2786 |
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| Symbol | rpoE |
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| ID | 4883812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 2752741 |
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| End bp | 2753340 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640128714 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001059807 |
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| Protein GI | 126440339 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGTGAAA AAGAAATCGA TCAGGTACTG GTCGAACGCG TACAGAATGG CGACAAGGCG
GCGTTCGAAC TCCTGGTCTC CAAATACCAC CGCAAGATCA TCCGGCTGAT CTCGCGCCTC
GTGCGGGATC CCGCGGAGGT CGAGGACGTG GCCCAGGACG CGTTCATCAA GGCGTATCGC
GCGTTGCCGC AGTTTCGCGG CGAGTCGGCG TTCTACACGT GGTTGTACCG GATTGCCGTC
AATACGGCGA AGAACTACCT TGCGACCCAG GGGCGCCGGG CGCCCACGTC CACCGACGCG
GACGCCGAAG AGGCTGAAAC TTTCTCCGAC GCGGACCAAC TAAGGGATAT CAACACGCCT
GAGTCGATGT TGATGAGCAA GCAGATCGCC CAAACGGTCA ACGCCGCGAT GGCGCTGTTG
CCGGAAGAGT TGCGAACGGC CATCACGCTG CGCGAGATCG AAGGTCTGAG CTACGAAGAG
ATCGCGGAGA TGATGGGTTG CCCGATCGGC ACCGTTCGCT CGCGGATCTT TCGCGCCCGC
GAGGCGATCG CGGCAAAATT GCGGCCGCTG CTCGATACGC CGGAAGGCAG GCGCTGGTAA
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| Protein sequence | MSEKEIDQVL VERVQNGDKA AFELLVSKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRAPTSTDA DAEEAETFSD ADQLRDINTP
ESMLMSKQIA QTVNAAMALL PEELRTAITL REIEGLSYEE IAEMMGCPIG TVRSRIFRAR
EAIAAKLRPL LDTPEGRRW
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