Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2451 |
Symbol | dapE |
ID | 4881850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 2418988 |
End bp | 2420127 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640128379 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001059483 |
Protein GI | 126440441 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.684558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCA CCCTTGCCCT CACCGAACAG CTGATCGCGC GCGCGTCCGT CACGCCCGAC GATCAGCACT GCCAGCAATT GATGATCGAG CGCCTCGCCG CCCTCGGCTT CGAGTGCGAA ACGATCGCGT CGCACGGCGT GACGAACTTC TGGGCCGTCA AGCGCGGCAC GGCCGGCCGC GCAGGCAAGC TGCTCGCGTT CGCGGGCCAT ACCGACGTCG TGCCGACCGG CCCGCTCGAG CAGTGGAGCT CGCCGCCGTT CGTGCCGACG CACCGCGACG GCAAGCTGTA CGGCCGCGGC GCGGCCGACA TGAAAACCTC GCTCGCGGGC TTCGTCGTCG CGGCCGAGGA GTTCGTCGCC GCGCATCCGC AGCACCGCGG CTCGATCGGT TTCCTGATCA CGAGCGACGA GGAAGGCCCG GCCACCGACG GCACCGTGAA AGTCGTCGAG GCGCTCGCCG CGCGCGGCGA GCGCCTCGAT TACTGCATCG TCGGCGAACC GACCTCGACG GCGACGCTCG GCGACGTCGT GAAGAACGGC CGGCGCGGCT CGATGTCGGG CGAGCTCGTC GTCAAGGGCG TGCAAGGCCA TATCGCGTAT CCGCATCTCG CGAAGAACCC GATCCATCTG CTCGCGCCGG CGCTCGCCGA GCTCGCCGCC GAGCAATGGG ACGAAGGCAA CGAGTACTTT CCGCCGACCA CCTGGCAGGT GTCGAACCTG CGCGCGGGCA CCGGCGCGAC GAACGTGATT CCGGGCCACG CCGATCTGCT GTTCAACTTC CGCTTCTCGA CGGCGAGCAC GGTCGAGGGC CTGCAGGCGC GCGTGCACGC GATCCTCGAC AGGCACGGGC TCGATTACAC GCTGAACTGG TCGGTGAGCG GCCTGCCGTT CCTCACGCCG CGCGGCGAGC TGTCGAACGC GCTCGACGCC GCGATCCGCG CGGAAACGGG CGTCTCGCCC GAGCTGTCGA CGACGGGCGG CACGTCCGAC GGCCGCTTCA TCGCGCGCAT CTGCCCGCAG GTGATCGAGT TCGGCCCGCC AAACGCGAGC ATCCACAAGA TCGACGAGCA CATCGACGTG CGCTTCGTCG ACCCGCTGAA GAACGTGTAC CGCCGCGTGC TCGAACAACT GATCGCCTGA
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Protein sequence | MSATLALTEQ LIARASVTPD DQHCQQLMIE RLAALGFECE TIASHGVTNF WAVKRGTAGR AGKLLAFAGH TDVVPTGPLE QWSSPPFVPT HRDGKLYGRG AADMKTSLAG FVVAAEEFVA AHPQHRGSIG FLITSDEEGP ATDGTVKVVE ALAARGERLD YCIVGEPTST ATLGDVVKNG RRGSMSGELV VKGVQGHIAY PHLAKNPIHL LAPALAELAA EQWDEGNEYF PPTTWQVSNL RAGTGATNVI PGHADLLFNF RFSTASTVEG LQARVHAILD RHGLDYTLNW SVSGLPFLTP RGELSNALDA AIRAETGVSP ELSTTGGTSD GRFIARICPQ VIEFGPPNAS IHKIDEHIDV RFVDPLKNVY RRVLEQLIA
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