Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_2441 |
Symbol | def-2 |
ID | 4882575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 2407155 |
End bp | 2407688 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640128369 |
Product | peptide deformylase |
Protein accession | YP_001059473 |
Protein GI | 126440852 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.126413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGCG AGATTCTGAA GATGGGCGAT CCACGTCTGC TGGAAGTCGC CCGGCCGGTG GAGGCGTTCA ACACGCCGGA GCTGCACGCG CTCGTCGCGG ACATGTTCGA GACGATGCAT CACGCGAACG GCGCGGGGCT CGCCGCGCCG CAGATCGGCG TCGGGTTGCA GGTGATCATC TTCGGCTTCG GCAGCAGCGA GCGCTACCCG GAGGCGCCGC CCGTGCCGGA GACGGTGCTC GTCAATCCGA GCATCGAGTA CTTGCCGCCC GACCTGGAGG AGGGCTGGGA GGGCTGCCTG TCGGTGCCGG GGCTGCGCGG CGTCGTGAGC CGCTACCGGC GCGTGCGCTA CAGCGGCTTC GACCAGTACG GCGCGAAGCT CGAGCGGATC GCGGAAGGCT TCCACGCGCG GGTCGTCCAG CACGAATACG ATCATCTGAT CGGCAAGCTC TATCCGATGC GGATCACCGA TTTCTCGAAG TTCGGCTTCG CCGACGTGCT GTTCCCGGGG CTCGACGCGC AAGCAGACGA CTGA
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Protein sequence | MIREILKMGD PRLLEVARPV EAFNTPELHA LVADMFETMH HANGAGLAAP QIGVGLQVII FGFGSSERYP EAPPVPETVL VNPSIEYLPP DLEEGWEGCL SVPGLRGVVS RYRRVRYSGF DQYGAKLERI AEGFHARVVQ HEYDHLIGKL YPMRITDFSK FGFADVLFPG LDAQADD
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