Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1988 |
Symbol | |
ID | 4881917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1964761 |
End bp | 1965984 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640127916 |
Product | outer membrane porin |
Protein accession | YP_001059023 |
Protein GI | 126442232 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCTC GCGCGGCCCG GCAGCTTCCC GGCAACCGCC GGCTCGCGCG CCTCGCCGGC GCCGCCGCCG CGGCATGCGC CGCCGGCTTC GGCGCGAGCA CGGCTCATGC GCAAAGCAGC GTCGTGCTGT ACGGCCTGAT CGATACGTCG ATCACCTACG CGAACAACCA GCGCACCCAC GGAGCCGGCT CGCCAGGAGG CCCCGGCTGG GCCGTGACGA GCGGCGCGCT CAATGCGTCA CGCTGGGGAT TGCGCGGCCG CGAAGACCTC GGCAACGGCG TGTCGGCGAT CTTCGCGCTC GAGAACGGCT TCTCGGGGGC AAGCGGCGCG CTATCGCAAA AGGGCGTCGA CATGTTCGGC CGGCAGGCAT GGATCGGACT GAAATCGAAG GAAGGGGGCG CGCTCACGCT CGGCCGCCAG TACGACCTCA TCCTGGATTT CGTCACGCCG CTCGGCGCGT CGGGGCCCGG CTGGGGCGGC AACCTCGCCG TTCACCCGTA CGACAACGAC GACTCGAACC GCAACATCCG CATCAACAAC GCGGTCAAGT ACACGAGCCC GACATACCGC GGATGGACCC TCGGCGCAAT GTACGGCTTC TCGAACACGG CGGGCCAGTT CGGCAACAAC GCGGCGTGGA GCGCGGGCCT GTCCTATGCG AACGGCCCGC TGAAACTCGG CGCCGGCTAT CTGAGAATCA ATCGGAATCC GAACGCCGCG AACGCGAACG GCGCGCTGAG CACGACGGAC GGCTCGGCGA CGATCACGGG CGGCAGCCAG CAGATCTGGG CCGTCGCGGG CCGCTATGCG TTCGGGCCGC ATTCGATCGG CGCCGCGTGG TCCCATTCAG CCACCGACCG CGTGAGCGGC GTGCTCCAGG GCGGCAGCAT CGCGAAGCTC GACGGCAATT CGCTCGTCTT CGACAATTTC ACGCTCGACG GGCGCTACGT CGTCACGCCG AGGTTGAGCC TCGCGGCGGC GTATACGTAC ACGATGGGCC GCTTCGACGC GCGCTCGGGC GAAACCCGTC CGAAGTGGAA TCACATGGTC GCGCAAGCCG ATTACGCGTT CTCGATCCGC ACGGACGCGT ATCTCGAGGC CGTCTATCAG CGCGTGAGCG GCGGCAACGG CATTCCGGCG TTCAACGCGA CGATCTGGAC GCTGACGCCG TCCGCGAACG GCAATCAGGT CGTTGTCGCG CTGGGGCTGC GGCATCGGTT CTAG
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Protein sequence | MSARAARQLP GNRRLARLAG AAAAACAAGF GASTAHAQSS VVLYGLIDTS ITYANNQRTH GAGSPGGPGW AVTSGALNAS RWGLRGREDL GNGVSAIFAL ENGFSGASGA LSQKGVDMFG RQAWIGLKSK EGGALTLGRQ YDLILDFVTP LGASGPGWGG NLAVHPYDND DSNRNIRINN AVKYTSPTYR GWTLGAMYGF SNTAGQFGNN AAWSAGLSYA NGPLKLGAGY LRINRNPNAA NANGALSTTD GSATITGGSQ QIWAVAGRYA FGPHSIGAAW SHSATDRVSG VLQGGSIAKL DGNSLVFDNF TLDGRYVVTP RLSLAAAYTY TMGRFDARSG ETRPKWNHMV AQADYAFSIR TDAYLEAVYQ RVSGGNGIPA FNATIWTLTP SANGNQVVVA LGLRHRF
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