| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1840 |
|---|
| Symbol | nodI |
|---|
| ID | 4885661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 1804141 |
|---|
| End bp | 1805055 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640127768 |
|---|
| Product | nodulation ABC transporter NodI |
|---|
| Protein accession | YP_001058875 |
|---|
| Protein GI | 126440572 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG CACCCATCGA TTTTCAACAA GTCGAGAAAC GCTACGACGA CAAGCTCGTC
GTCGACGGTT TGTCGTTTCA CGTGCAGCCC GGCGAATGCT TCGGTCTGCT CGGCCCGAAC
GGCGCAGGCA AGACGACGAC GCTCAAGATG CTGCTCGGCA TCACGCACCC CGACGCAGGT
TCGATCAGTC TGTGCGGCGA ACCCGTGCCG TCCCGCGCGC GGCACGCGCG GCAGCGCGTC
GGCGTCGTGC CGCAGTTCGA CAATCTCGAT CCCGACTTCA CCGTTCGCGA GAACCTGCTC
GTGTTCGCCC GCTACTTCGG ACTGACCGCC CACGCGGCGC GCGCGCTCGT GCCGCCGCTG
CTCGAGTTCG CGAAGCTCGA AAGCAAGGCG GACGCGAAGG TGGGCGAGCT CTCGGGCGGG
ATGAAGCGGC GGCTCACGCT CGCGCGCGCG CTCGTCAACG ATCCCGACGT GCTCGTGCTC
GACGAGCCGA CGACGGGCCT CGATCCGCAA GCCCGGCACC TGATGTGGGA GCGGCTGCGC
TCGCTGCTCG CGCGCGGCAA GACGATTCTG CTCACCACGC ACTTCATGGA AGAGGCCGAG
CGTTTGTGCC ATCGCCTGTG CGTGATCGAG GAAGGCCGCA AGATTGCGGA AGGCGCGCCG
CGCATGCTGA TCGAAGCGGA AATCGGCTGC GACGTGATCG AGATCTACGG GCCCGATCCC
GTGCAGCTTC GCGACGAGCT CGCGCCCTTC GCCGAGCGCA CCGAGATCAG CGGCGAAACG
CTCTTTTGCT ACGTCGACAA TCCGGAGCCG ATCCACGCGC GCCTGAAAGG CCGCGCCGGC
CTGCGCTATC TGCACCGCCC CGCGAATCTC GAAGACGTAT TCCTGCGGCT GACCGGCCGC
GAGATGCTGG ATTGA
|
|---|
| Protein sequence | MSVAPIDFQQ VEKRYDDKLV VDGLSFHVQP GECFGLLGPN GAGKTTTLKM LLGITHPDAG
SISLCGEPVP SRARHARQRV GVVPQFDNLD PDFTVRENLL VFARYFGLTA HAARALVPPL
LEFAKLESKA DAKVGELSGG MKRRLTLARA LVNDPDVLVL DEPTTGLDPQ ARHLMWERLR
SLLARGKTIL LTTHFMEEAE RLCHRLCVIE EGRKIAEGAP RMLIEAEIGC DVIEIYGPDP
VQLRDELAPF AERTEISGET LFCYVDNPEP IHARLKGRAG LRYLHRPANL EDVFLRLTGR
EMLD
|
|---|
| |