Gene BURPS668_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1770 
Symbol 
ID4884868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1746640 
End bp1747983 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content68% 
IMG OID640127698 
Producttype II/IV secretion system protein 
Protein accessionYP_001058809 
Protein GI126439786 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACG ACATTCAATT TGCCGACGGG GCGACGCCGT TCTCGCAAAC GCAGCAGTTT 
CACGACATCA AGAACGCGGC GCACGAGCAT CTCCTCACGC GCATCGAGGA GCTGGGCGCG
GAGTTCGGGC GCTGGTCGCG GCAGGCGATC AATCAGTTCG TCGATCTCGA GATCGACAGC
TTCGTGCGGC TGCGCCGCAT TCCGCTCAAC GAGAACGAAG TGCGGGCGAT CGCCGAGGCG
CTGACCAAGG AGCTCGCGGG CTTCGGGCCG ATCGAGGACC TGCTCGCGGA TCCGCACGTC
GAGGACATCC TGATCAACGG CTACAGCGAC GTCTACGTGT CGAAGCACGG CATCCTCACG
AAGCTGCCCG TGCGCTTCAC CGACAACGCG CACCTGCTGC GGATCGTGCG GCGCATTCTC
GCGCCGATCG GCCGCCGGCT CGACGAGTCC AATCCGATGG TCGACGCGCG GCTGCCGGAC
GGCGGGCGCG TGAACGTCGT GATCGAGCCG CTGTCGATCG ACGGCCCGGT CGTGTCGATC
CGCAAGTTCC GCAAGGATCC GTTAAAGCCC GCCGATCTGC TCGCGAACGG CACCTTCAAC
GACGAGATCG GCGCGCTGCT CGAGGCCGCG GTCGTCGCGC GCTGCAACAT TCTCGTGTCG
GGCGGCACGA GCTCCGGCAA GACCTCGCTC CTGAACGCCC TCGCGTTCCA CATTCCGGGC
ATCGAGCGCG TCGTGACGAT CGAGGACACG GCCGAGCTCT CGCTCAACCA CCCGCACGTC
GTGCGGCTCG AGAGCCGCCC CGGCGGCTTT GACGGCACGG GCGTCGTGTC GATCCGCGAT
CTGCTGCGCA ACACGCTGCG GATGCGCCCG GACCGGATCA TCGTCGGCGA AGTGCGCGGC
GGCGAAGTGC TCGAGATGAT GCAGGCGATG AACACCGGCC ACGACGGCTC GATGGGCACG
ATCCACGCGA GCTCGCCGCG CGAGTGCCTG TACCGCCTCG AGATGCTCGC CGGCTTCGCG
GGCTTCCAGG GCACCGAATC GAGCCTGCGC CGGCAGATCG CGAACGCGGT CGATTTCATC
GTCCAGATCG GGCGGCTGTC GAACGGGCGG CGGCGCATCC TGTCGGTCAC CGAGGTGACG
GGGCTGTCCG ACAACATCAT CGCGACGCAG GAGCTCTACC GCTACGAGCC GCGCGTGAAC
GCGGACGGCG ACGAGATCGA CGCGTGGGAA TCGCTCGGCA TCCATCCGCA CTCGCCGAAG
CTCGCGCGCT TCAGGCAGGC ACTGTCGGGC GGCGGCTTCG GCGGCGGCGA GCCGTACGGG
CGCGGCGGAG GCTTCAATGT CTAG
 
Protein sequence
MAHDIQFADG ATPFSQTQQF HDIKNAAHEH LLTRIEELGA EFGRWSRQAI NQFVDLEIDS 
FVRLRRIPLN ENEVRAIAEA LTKELAGFGP IEDLLADPHV EDILINGYSD VYVSKHGILT
KLPVRFTDNA HLLRIVRRIL APIGRRLDES NPMVDARLPD GGRVNVVIEP LSIDGPVVSI
RKFRKDPLKP ADLLANGTFN DEIGALLEAA VVARCNILVS GGTSSGKTSL LNALAFHIPG
IERVVTIEDT AELSLNHPHV VRLESRPGGF DGTGVVSIRD LLRNTLRMRP DRIIVGEVRG
GEVLEMMQAM NTGHDGSMGT IHASSPRECL YRLEMLAGFA GFQGTESSLR RQIANAVDFI
VQIGRLSNGR RRILSVTEVT GLSDNIIATQ ELYRYEPRVN ADGDEIDAWE SLGIHPHSPK
LARFRQALSG GGFGGGEPYG RGGGFNV