Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1770 |
Symbol | |
ID | 4884868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1746640 |
End bp | 1747983 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640127698 |
Product | type II/IV secretion system protein |
Protein accession | YP_001058809 |
Protein GI | 126439786 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACG ACATTCAATT TGCCGACGGG GCGACGCCGT TCTCGCAAAC GCAGCAGTTT CACGACATCA AGAACGCGGC GCACGAGCAT CTCCTCACGC GCATCGAGGA GCTGGGCGCG GAGTTCGGGC GCTGGTCGCG GCAGGCGATC AATCAGTTCG TCGATCTCGA GATCGACAGC TTCGTGCGGC TGCGCCGCAT TCCGCTCAAC GAGAACGAAG TGCGGGCGAT CGCCGAGGCG CTGACCAAGG AGCTCGCGGG CTTCGGGCCG ATCGAGGACC TGCTCGCGGA TCCGCACGTC GAGGACATCC TGATCAACGG CTACAGCGAC GTCTACGTGT CGAAGCACGG CATCCTCACG AAGCTGCCCG TGCGCTTCAC CGACAACGCG CACCTGCTGC GGATCGTGCG GCGCATTCTC GCGCCGATCG GCCGCCGGCT CGACGAGTCC AATCCGATGG TCGACGCGCG GCTGCCGGAC GGCGGGCGCG TGAACGTCGT GATCGAGCCG CTGTCGATCG ACGGCCCGGT CGTGTCGATC CGCAAGTTCC GCAAGGATCC GTTAAAGCCC GCCGATCTGC TCGCGAACGG CACCTTCAAC GACGAGATCG GCGCGCTGCT CGAGGCCGCG GTCGTCGCGC GCTGCAACAT TCTCGTGTCG GGCGGCACGA GCTCCGGCAA GACCTCGCTC CTGAACGCCC TCGCGTTCCA CATTCCGGGC ATCGAGCGCG TCGTGACGAT CGAGGACACG GCCGAGCTCT CGCTCAACCA CCCGCACGTC GTGCGGCTCG AGAGCCGCCC CGGCGGCTTT GACGGCACGG GCGTCGTGTC GATCCGCGAT CTGCTGCGCA ACACGCTGCG GATGCGCCCG GACCGGATCA TCGTCGGCGA AGTGCGCGGC GGCGAAGTGC TCGAGATGAT GCAGGCGATG AACACCGGCC ACGACGGCTC GATGGGCACG ATCCACGCGA GCTCGCCGCG CGAGTGCCTG TACCGCCTCG AGATGCTCGC CGGCTTCGCG GGCTTCCAGG GCACCGAATC GAGCCTGCGC CGGCAGATCG CGAACGCGGT CGATTTCATC GTCCAGATCG GGCGGCTGTC GAACGGGCGG CGGCGCATCC TGTCGGTCAC CGAGGTGACG GGGCTGTCCG ACAACATCAT CGCGACGCAG GAGCTCTACC GCTACGAGCC GCGCGTGAAC GCGGACGGCG ACGAGATCGA CGCGTGGGAA TCGCTCGGCA TCCATCCGCA CTCGCCGAAG CTCGCGCGCT TCAGGCAGGC ACTGTCGGGC GGCGGCTTCG GCGGCGGCGA GCCGTACGGG CGCGGCGGAG GCTTCAATGT CTAG
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Protein sequence | MAHDIQFADG ATPFSQTQQF HDIKNAAHEH LLTRIEELGA EFGRWSRQAI NQFVDLEIDS FVRLRRIPLN ENEVRAIAEA LTKELAGFGP IEDLLADPHV EDILINGYSD VYVSKHGILT KLPVRFTDNA HLLRIVRRIL APIGRRLDES NPMVDARLPD GGRVNVVIEP LSIDGPVVSI RKFRKDPLKP ADLLANGTFN DEIGALLEAA VVARCNILVS GGTSSGKTSL LNALAFHIPG IERVVTIEDT AELSLNHPHV VRLESRPGGF DGTGVVSIRD LLRNTLRMRP DRIIVGEVRG GEVLEMMQAM NTGHDGSMGT IHASSPRECL YRLEMLAGFA GFQGTESSLR RQIANAVDFI VQIGRLSNGR RRILSVTEVT GLSDNIIATQ ELYRYEPRVN ADGDEIDAWE SLGIHPHSPK LARFRQALSG GGFGGGEPYG RGGGFNV
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