Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1481 |
Symbol | rrmJ |
ID | 4885641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 1444833 |
End bp | 1445495 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640127409 |
Product | ribosomal RNA large subunit methyltransferase J |
Protein accession | YP_001058524 |
Protein GI | 126438553 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.986229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA ACCGCTTTAA CCAATCCTGG TTGCACGACC ACATCAACGA CCCGTACGTC AAAATGGCGC AGCGGGAAGG GTACCGCGCG CGCGCCGCGT ACAAGCTGAA GGAAATCGAC GAGCAGGACA AGCTGATCCG CCCGGGCCAG GTGATCGTCG ATCTGGGCGC GGCGCCGGGC AGCTGGAGCC AGTACGCGCG CAACAAGCTC GCGCAGGGCA AGCGGCGCGA CGCGGTGCGC GAGGGCGGCA TCGACGGCAC GATCATCGCG CTCGACATGC TGCCGATGGA GCCCGTCGCC GACGTCCATT TCATCCAGGG CGACTTCCGC GAGGAGAGCG TGCTGCATCA ATTGGAGGAA GTCCTCGCCG GGCGCGCGGT CGACCTTGTA ATTTCCGACA TGGCCCCCAA CCTGTCCGGC GTGGCGGTCG CGGATGCGGC GCGGATCGAG CATGTCTGCG ATCTGGCGCT CGAATTCGCG CAAAACCATC TGAAGCCGGA TGGCGCCCTT TTGGTGAAAT GCTTTCACGG CAGCGGCTAC AGCCAGATCG TCGAGAAATT CAAGCACCAA TTTAAAACGG TGGCGCCGCG CAAGCCAAAA GCTTCCCGCG ACAAATCGTC CGAAACGTTT ATTTTGGGTC GGCATCTGAA GCAGCCGCGC TGA
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Protein sequence | MAKNRFNQSW LHDHINDPYV KMAQREGYRA RAAYKLKEID EQDKLIRPGQ VIVDLGAAPG SWSQYARNKL AQGKRRDAVR EGGIDGTIIA LDMLPMEPVA DVHFIQGDFR EESVLHQLEE VLAGRAVDLV ISDMAPNLSG VAVADAARIE HVCDLALEFA QNHLKPDGAL LVKCFHGSGY SQIVEKFKHQ FKTVAPRKPK ASRDKSSETF ILGRHLKQPR
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